RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 OR4K13Q8NH42 304 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 DUSP19Q8WTR2 217 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 CDS1Q92903 461 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 BIN3Q9NQY0 253 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 COMMD9Q9P000 198 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 IL36AQ9UHA7 158 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 INSL5Q9Y5Q6 135 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 OR14I1A6ND48 311 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 ABCD4O14678 606 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 SELENOFO60613 162 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 AQP8O94778 261 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 RPP14O95059 124 aaKnown RBP13.13□□□□□ -0.31
SHPK-201ENST00000225519 VSIG10L2P0DP72 767 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 CTSAP10619 480 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
SHPK-201ENST00000225519 ADH7P40394 386 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 CAPZA2P47755 286 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 MLC1Q15049 377 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 ZNF805Q5CZA5 627 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 CAPN10Q9HC96 672 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 TP53BP1Q12888 1972 aaPredicted RBP13.13□□□□□ -0.31
SHPK-201ENST00000225519 BHLHE40O14503 412 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 HOXA2O43364 376 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 PAK4O96013 591 aaPredicted RBP13.13□□□□□ -0.31
SHPK-201ENST00000225519 UBBP0CG47 229 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
SHPK-201ENST00000225519 GTF2F2P13984 249 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 GRPRP30550 384 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 RPS27AP62979 156 aaKnown RBP13.13□□□□□ -0.31
SHPK-201ENST00000225519 UBA52P62987 128 aaKnown RBP13.13□□□□□ -0.31
SHPK-201ENST00000225519 TNFRSF17Q02223 184 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 DUSP2Q05923 314 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 UBE3DQ7Z6J8 389 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 BEST3Q8N1M1 668 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 EID2Q8N6I1 236 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 SLC16A11Q8NCK7 471 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 SDR9C7Q8NEX9 313 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 NSMAFQ92636 917 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 VOPP1Q96AW1 172 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 MOAP1Q96BY2 351 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 ST6GALNAC2Q9UJ37 374 aa13.13□□□□□ -0.31
SHPK-201ENST00000225519 GPR31O00270 319 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 RPN2P04844 631 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 ZNF806P0C7X5 589 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 LUMP51884 338 aaPredicted RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 ACTA2P62736 377 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 ACTG2P63267 376 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 PABPC1L2AQ5JQF8 200 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 FAM199XQ6PEV8 388 aaPredicted RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 ZNF793Q6ZN11 406 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 DPPA4Q7L190 304 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 C2CD4CQ8TF44 421 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 ACTRT3Q9BYD9 372 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 PLEKHA1Q9HB21 404 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 ZNF106Q9H2Y7 1883 aaKnown RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 A0A1W2PR48 441 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 ANKRD61A6NGH8 418 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 DUXAA6NLW8 204 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 KLF4O43474 513 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 MRPS10P82664 201 aaKnown RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 RAB12Q6IQ22 244 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 TMPRSS12Q86WS5 348 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 MUC20Q8N307 709 aaPredicted RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 SLC25A38Q96DW6 304 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 CNN2Q99439 309 aaKnown RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 XKR8Q9H6D3 395 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 ASF1BQ9NVP2 202 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 AIFM1O95831 613 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 ITPKBP27987 946 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 CALCRP30988 508 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 PSMD4P55036 377 aaKnown RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 TAS2R20P59543 309 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 REEP5Q00765 189 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 PRAMEF8Q5VWM4 474 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 PRAMEF7Q5VXH5 474 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 RPL22L1Q6P5R6 122 aaKnown RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 RNF180Q86T96 592 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 KCT2Q8NC54 265 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 TMIEQ8NEW7 156 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 NUS1Q96E22 293 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 MRPL48Q96GC5 212 aaKnown RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 MTHFD2LQ9H903 347 aaPredicted RBP13.12□□□□□ -0.31
SHPK-201ENST00000225519 ADAM29Q9UKF5 820 aa13.12□□□□□ -0.31
SHPK-201ENST00000225519 NPIPA5A0A0B4J1W7 369 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 NPIPA7E9PJI5 369 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 GNB5O14775 395 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 ATG12O94817 140 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 NPIPA8P0DM63 369 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 PRMT2P55345 433 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 POU4F2Q12837 409 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 TAF13Q15543 124 aa13.11□□□□□ -0.31
SHPK-201ENST00000225519 ZNF836Q6ZNA1 936 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms