RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CSNK1A1LQ8N752 337 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ART5Q96L15 291 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 TBX5Q99593 518 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 CAPN10Q9HC96 672 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ZC3H12DA2A288 527 aaKnown RBP22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 J3QLW9 94 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 EIF4EP06730 217 aaKnown RBP22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ZNF19P17023 458 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 FUT1P19526 365 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 RAB3BP20337 219 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ACAA2P42765 397 aaKnown RBP22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ID2Q02363 134 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 RIPPLY1Q0D2K3 151 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ZNF141Q15928 474 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 CCDC58Q4VC31 144 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ULK3Q6PHR2 472 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 B3GLCTQ6Y288 498 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 GHDCQ8N2G8 530 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 CNOT9Q92600 299 aaKnown RBP22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 CCNL2Q96S94 520 aaPredicted RBP22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 PTTG3PQ9NZH4 202 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 MRPS2Q9Y399 296 aaKnown RBP22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 CACNG2Q9Y698 323 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 CACNA1EQ15878 2313 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 GXYLT2A0PJZ3 443 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 NOTOA8MTQ0 251 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 PPM1BO75688 479 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 PPP1R3DO95685 299 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 CBX7O95931 251 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 TYRP1P17643 537 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 NOS3P29474 1203 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 GPR143P51810 404 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 GBX2P52951 348 aaPredicted RBP22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLC16A1P53985 500 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 RAG2P55895 527 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 TRMT10AQ8TBZ6 339 aaKnown RBP22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 HYLS1Q96M11 299 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLC38A3Q99624 504 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 MCCC2Q9HCC0 563 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 DNAJB12Q9NXW2 375 aaKnown RBP22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 FLRT3Q9NZU0 649 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 ST6GALNAC2Q9UJ37 374 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 ICAM5Q9UMF0 924 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 SCN3AQ9NY46 2000 aa22.86■■□□□ 1.25
RUNDC3A-201ENST00000225441 C7orf66A4D0T2 115 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 ZNF860A6NHJ4 632 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 PATE3B3GLJ2 98 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 E9PI62 339 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 UBL3O95164 117 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 NDUFB2O95178 105 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 E2F1Q01094 437 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 PLAURQ03405 335 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 HSF2Q03933 536 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLC3A1Q07837 685 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 EXOSC7Q15024 291 aaKnown RBP22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 LPAL2Q16609 132 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLC35D3Q5M8T2 416 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 FAAH2Q6GMR7 532 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 ARMC6Q6NXE6 501 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 CREB3L2Q70SY1 520 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 ZNF767PQ75MW2 155 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 OVCH1Q7RTY7 1134 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 KANSL1Q7Z3B3 1105 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 TMEM52Q8NDY8 209 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 OIT3Q8WWZ8 545 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 TNFRSF13CQ96RJ3 184 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 ABCG5Q9H222 651 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 PPIL3Q9H2H8 161 aaKnown RBP22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 CHRNA9Q9UGM1 479 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 NUBP2Q9Y5Y2 271 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 NPIPA5A0A0B4J1W7 369 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 NPIPA7E9PJI5 369 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 HYAL3O43820 417 aaPredicted RBP22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 FZD7O75084 574 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 CT62P0C5K7 136 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 NPIPA8P0DM63 369 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 MMP15P51511 669 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 SKP1P63208 163 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 RPL22L1Q6P5R6 122 aaKnown RBP22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 OR52R1Q8NGF1 315 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 OR51A7Q8NH64 312 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 GHSRQ92847 366 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 CNN2Q99439 309 aaKnown RBP22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 DPAGT1Q9H3H5 408 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 PLSCR3Q9NRY6 295 aa22.85■■□□□ 1.25
RUNDC3A-201ENST00000225441 TRAV27A0A087WT01 109 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLC9B1P1A6NJY1 282 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 EFCAB7A8K855 629 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 YKT6O15498 198 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 GPRIN2O60269 458 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 ZNF24P17028 368 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 OR12D2P58182 307 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 FHL1Q13642 323 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 CDONQ4KMG0 1287 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 TRIM61Q5EBN2 209 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 ALG10BQ5I7T1 473 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 C6orf183Q5T699 404 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLC23A3Q6PIS1 610 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLC35F3Q8IY50 421 aa22.84■■□□□ 1.25
RUNDC3A-201ENST00000225441 ADAMTS18Q8TE60 1221 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms