RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 A0A1B0GWA3 101 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 HSPB6O14558 160 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 DENRO43583 198 aaKnown RBP17.11■□□□□ 0.33
CLIP2-201ENST00000223398 PRKNO60260 465 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-201ENST00000223398 DNAJB5O75953 348 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 OR8G3PP0DMU2 310 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 ARL3P36405 182 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 BEST3Q8N1M1 668 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 CNOT11Q9UKZ1 510 aaKnown RBP17.11■□□□□ 0.33
CLIP2-201ENST00000223398 EVPLQ92817 2033 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 ATP1B3P54709 279 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 COL28A1Q2UY09 1125 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 DDX60LQ5H9U9 1706 aaKnown RBP17.11■□□□□ 0.33
CLIP2-201ENST00000223398 FRMPD2BQ6IN97 320 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 RETREG3Q86VR2 466 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 LINC00346Q8IVM7 164 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 OR1N1Q8NGS0 311 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 ELP4Q96EB1 424 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 MICU1Q9BPX6 476 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 IGLV3-27P01718 113 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 ERVK-16P61578 105 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 DPTQ07507 201 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 MEX3BQ6ZN04 569 aaKnown RBP17.1■□□□□ 0.33
CLIP2-201ENST00000223398 NDUFAF7Q7L592 441 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 KANSL1Q7Z3B3 1105 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 AGPAT4Q9NRZ5 378 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 STT3AP46977 705 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 BDH1Q02338 343 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 KDM8Q8N371 416 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 PLA2G2FQ9BZM2 168 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 OR51E2Q9H255 320 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 PDFQ9HBH1 243 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 SLC23A2Q9UGH3 650 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 CD34P28906 385 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 OPRD1P41143 372 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 RAB40BQ12829 278 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF813Q6ZN06 617 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 STOML3Q8TAV4 291 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 NUDT8Q8WV74 236 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 CCDC74BQ96LY2 380 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 C1QTNF6Q9BXI9 259 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 TRAV36DV7A0A075B6V5 113 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 HLA-BQ31612 363 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 MFSD12Q6NUT3 480 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 CMTM1Q8IZ96 169 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 TMEM255BQ8WV15 326 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 MS4A6EQ96DS6 147 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF578Q96N58 590 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-201ENST00000223398 NMNAT3Q96T66 252 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 R4GN57 208 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 SCN7AQ01118 1682 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 GLSO94925 669 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-201ENST00000223398 MTHFD2P13995 350 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 Q6ZNB5 142 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 OR7G1Q8NGA0 311 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 NDNFQ8TB73 568 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 SYNPRQ8TBG9 265 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 NLKQ9UBE8 527 aa17.1■□□□□ 0.33
CLIP2-201ENST00000223398 GLULP15104 373 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 GABRG2P18507 467 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ARNTP27540 789 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ASTLQ6HA08 431 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-201ENST00000223398 SPNS2Q8IVW8 549 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF695Q8IW36 515 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 STT3BQ8TCJ2 826 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 SNX11Q9Y5W9 270 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 M0R233 179 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 DVL2O14641 736 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 TUBG1P23258 451 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 SPRED3Q2MJR0 410 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 AGBL4Q5VU57 503 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF687Q8N1G0 1237 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ZFP90Q8TF47 636 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 CHTF18Q8WVB6 975 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 TMEM72A0PK05 275 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 TSPAN9O75954 239 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ATG12O94817 140 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 GSG1LQ6UXU4 331 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 COX15Q7KZN9 410 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 COQ10AQ96MF6 247 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF696Q9H7X3 374 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF587BE7ETH6 402 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 TNFSF12O43508 249 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 ABHD16AO95870 558 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 METAP1P53582 386 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 OLAHQ9NV23 265 aa17.09■□□□□ 0.33
CLIP2-201ENST00000223398 CREBL2O60519 120 aaPredicted RBP17.08■□□□□ 0.33
CLIP2-201ENST00000223398 S100A1P23297 94 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 HSD17B7P56937 341 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 TSPAN31Q12999 210 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 ESPNLQ6ZVH7 1005 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 TSLPQ969D9 159 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 COQ3Q9NZJ6 369 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 HMX3A6NHT5 357 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 SERPINE2P07093 398 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 BTG2P78543 158 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 SLC36A2Q495M3 483 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 OR4K15Q8NH41 348 aa17.08■□□□□ 0.33
CLIP2-201ENST00000223398 CHPT1Q8WUD6 406 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms