RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ADGRG7Q96K78 797 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 BDH2Q9BUT1 245 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 PTDSS2Q9BVG9 487 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 POTEKPQ9BYX7 375 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 PRDM14Q9GZV8 571 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 ALKBH4Q9NXW9 302 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 HDGFL3Q9Y3E1 203 aa24.48■■□□□ 1.51
CHMP4B-201ENST00000217402 ENO4A6NNW6 628 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 TPOP07202 933 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 IMPDH2P12268 514 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 DNAJA1P31689 397 aaKnown RBP24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 DIO1P49895 249 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 C5orf46Q6UWT4 87 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 SLC25A36Q96CQ1 311 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 KLHL4Q9C0H6 718 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 PNPLA3Q9NST1 481 aa24.47■■□□□ 1.51
CHMP4B-201ENST00000217402 LRRN3E7EW58 273 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 SULT2B1O00204 365 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 BCKDKO14874 412 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 CXCL13O43927 109 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 OR10H3O60404 316 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 IFI30P13284 250 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 CBLP22681 906 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 OR7A5Q15622 319 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 TMPPEQ6ZT21 453 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 HS3ST5Q8IZT8 346 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 PQLC1Q8N2U9 271 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 ZNF843Q8N446 348 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 CENPNQ96H22 339 aaPredicted RBP24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 ZNF845Q96IR2 970 aaPredicted RBP24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 COL6A6A6NMZ7 2263 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 CCNB2O95067 398 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 FPR1P21462 350 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 OR2B6P58173 313 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 PDSS1Q5T2R2 415 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 PPP4R4Q6NUP7 873 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 CD163Q86VB7 1156 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 PM20D2Q8IYS1 436 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 RNF113BQ8IZP6 322 aaKnown RBP24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 ICA1LQ8NDH6 482 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 OR9Q2Q8NGE9 314 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 PIGXQ8TBF5 258 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 MIB2Q96AX9 1013 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 MOGAT1Q96PD6 335 aa24.46■■□□□ 1.51
CHMP4B-201ENST00000217402 MPDZO75970 2070 aa24.45■■□□□ 1.51
CHMP4B-201ENST00000217402 EIF4E1BA6NMX2 242 aaKnown RBP24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 C1QL1O75973 258 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 CH25HO95992 272 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 GPR4P46093 362 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 CARD18P57730 90 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 RPS3AP61247 264 aaKnown RBP24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 SGCBQ16585 318 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 GXYLT1Q4G148 440 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 FAM69AQ5T7M9 428 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF585AQ6P3V2 769 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 ST6GALNAC3Q8NDV1 305 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 OSTF1Q92882 214 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 BPIFA2Q96DR5 249 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 FAM46AQ96IP4 442 aaKnown RBP24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 TUBA1CQ9BQE3 449 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 TAPBPLQ9BX59 468 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 SRXN1Q9BYN0 137 aa24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 PDP1Q9P0J1 537 aaPredicted RBP24.45■■□□□ 1.5
CHMP4B-201ENST00000217402 SHANK1Q9Y566 2161 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 LIPT2A6NK58 231 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 B8ZZF3 427 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 SLC19A2O60779 497 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF23P17027 643 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 TLE1Q04724 770 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 RBPJQ06330 500 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 ZNF74Q16587 644 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 MICAQ29983 383 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 CHMP1BQ7LBR1 199 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 FAM57AQ8TBR7 257 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 SGTBQ96EQ0 304 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 MAGED1Q9Y5V3 778 aaPredicted RBP24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 CFAP46Q8IYW2 2715 aa24.44■■□□□ 1.5
CHMP4B-201ENST00000217402 SAC3D1A6NKF1 404 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 OR2T1O43869 369 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 PMS2P2O95744 297 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 BGLAPP02818 100 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 ANPEPP15144 967 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 CSNK2A1P68400 391 aaPredicted RBP24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 PRKCDQ05655 676 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 LTBQ06643 244 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 GK3PQ14409 553 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 EMC4Q5J8M3 183 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 PLXDC2Q6UX71 529 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 OR10G2Q8NGC3 310 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 MFSD8Q8NHS3 518 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 GIPC3Q8TF64 312 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 KRCC1Q9NPI7 259 aaPredicted RBP24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 FTCDNL1E5RQL4 147 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 MAKP20794 623 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 GTF2E2P29084 291 aaKnown RBP24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 ARHGDIAP52565 204 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 CTBP2P56545 445 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 SHQ1Q6PI26 577 aaKnown RBP24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 OR5K1Q8NHB7 308 aa24.43■■□□□ 1.5
CHMP4B-201ENST00000217402 DCLRE1BQ9H816 532 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms