RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 HLA-AP01891 365 aaKnown RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 PRKAR1BP31321 381 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 OR1D4P47884 311 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 SLC14A1Q13336 389 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CDKN3Q16667 212 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 IL1F10Q8WWZ1 152 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 HRASLS5Q96KN8 279 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF286AQ9HBT8 521 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 GCM1Q9NP62 436 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 AQP9O43315 295 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 SERPINA2P20848 420 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CD79BP40259 229 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 TSFMP43897 325 aaKnown RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 SIRPAP78324 504 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 REEP5Q00765 189 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 PEA15Q15121 130 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 BCL7AQ4VC05 210 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 HBMQ6B0K9 141 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 COX15Q7KZN9 410 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 OR56B1Q8NGI3 324 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 C7orf72A4D263 438 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 BCAT2O15382 392 aaPredicted RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CACNG3O60359 315 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 F11P03951 625 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 TFAP2AP05549 437 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 GM2AP17900 193 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 PRKACBP22694 351 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 NFYAP23511 347 aaPredicted RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 IL2RGP31785 369 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CLDN6P56747 220 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 NXNL2Q5VZ03 156 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 OR5M10Q6IEU7 315 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 ESX1Q8N693 406 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 NEURL3Q96EH8 262 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 EHFQ9NZC4 300 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 PSORS1C1Q9UIG5 152 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 A6NL46 340 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 SHOXO15266 292 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CD46P15529 392 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CR2P20023 1033 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 DAPP51397 102 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CAV3P56539 151 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 RRAS2P62070 204 aaPredicted RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 IL20RBQ6UXL0 311 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 APOOLQ6UXV4 268 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 VASH1Q7L8A9 365 aaPredicted RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 SLC16A14Q7RTX9 510 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 CLDN22Q8N7P3 220 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 PSMF1Q92530 271 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF566Q969W8 418 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 C1GALT1Q9NS00 363 aa12.62□□□□□ -0.39
SF3A1-201ENST00000215793 SIDT1Q9NXL6 827 aaKnown RBP12.62□□□□□ -0.39
SF3A1-201ENST00000215793 ANKRD33BA6NCL7 494 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 A6NIN4 97 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ARHGAP33O14559 1287 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 FZD7O75084 574 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 SLC34A2O95436 690 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 WDPCPO95876 746 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 OR8G3PP0DMU2 310 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ZP2Q05996 745 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 RBMS2Q15434 407 aaKnown RBP12.61□□□□□ -0.39
SF3A1-201ENST00000215793 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 OR6V1Q8N148 313 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 PIGCQ92535 297 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 UPRTQ96BW1 309 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 MSI2Q96DH6 328 aaKnown RBP12.61□□□□□ -0.39
SF3A1-201ENST00000215793 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 PRSS16Q9NQE7 514 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 CORINQ9Y5Q5 1042 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 MYO18AQ92614 2054 aaKnown RBP12.61□□□□□ -0.39
SF3A1-201ENST00000215793 AGPAT2O15120 278 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF780AO75290 641 aaPredicted RBP12.61□□□□□ -0.39
SF3A1-201ENST00000215793 TACR3P29371 465 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ERV3-1Q14264 604 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 TMEM176BQ3YBM2 270 aaPredicted RBP12.61□□□□□ -0.39
SF3A1-201ENST00000215793 FAM26DQ5JW98 314 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 MOB3CQ70IA8 216 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 NDUFAF7Q7L592 441 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF546Q86UE3 836 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 CYB5BO43169 146 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 SCRG1O75711 98 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 BDH1Q02338 343 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 PTRH1Q86Y79 214 aaKnown RBP12.61□□□□□ -0.39
SF3A1-201ENST00000215793 SLC43A2Q8N370 569 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 NIPAL2Q9H841 368 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ACKR4Q9NPB9 350 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 HAO2Q9NYQ3 351 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 NXT1Q9UKK6 140 aaKnown RBP12.61□□□□□ -0.39
SF3A1-201ENST00000215793 A0A1W2PPV4 95 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ADAM23O75077 832 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF254O75437 659 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 OPN1LWP04000 364 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 SCG5P05408 212 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 GPR155Q7Z3F1 870 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms