RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SUSD1Q6UWL2 747 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 PXT1Q8NFP0 134 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 SLC7A13Q8TCU3 470 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 VN1R3Q9BXE9 311 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 TPT1P8Q9HAU6 139 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 GAR1Q9NY12 217 aaKnown RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 PTTG2Q9NZH5 202 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 POLDIP2Q9Y2S7 368 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 ERVK-25P63136 954 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 C19orf54Q5BKX5 351 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 PHYHD1Q5SRE7 291 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 PARS2Q7L3T8 475 aaKnown RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 AMIGO2Q86SJ2 522 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 GABRG1Q8N1C3 465 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 OR4M1Q8NGD0 313 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 CPNE4Q96A23 557 aaPredicted RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 C12orf43Q96C57 262 aaKnown RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 SLC6A18Q96N87 628 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 FYTTD1Q96QD9 318 aaKnown RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 INIPQ9NRY2 104 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 MED17Q9NVC6 651 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 CDX4O14627 284 aaPredicted RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 PF4P02776 101 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 AADACP22760 399 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 ERVPABLB-1P60509 514 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 SMUG1Q53HV7 270 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 GPR153Q6NV75 609 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 H2BFWTQ7Z2G1 175 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 STUB1Q9UNE7 303 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 TRAPPC13A5PLN9 417 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 FAM90A27PA6NNH2 459 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 TNFRSF10AO00220 468 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 LEFTY1O75610 366 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 CDK2AP2O75956 126 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 ADRB2P07550 413 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 RAB3BP20337 219 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 GPLD1P80108 840 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 MVKQ03426 396 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 PRDX4Q13162 271 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 C9orf135Q5VTT2 229 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 EGFLAMQ63HQ2 1017 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 XYLT1Q86Y38 959 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 OR52E2Q8NGJ4 325 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 OR51A7Q8NH64 312 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 FBXO25Q8TCJ0 367 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 SOX7Q9BT81 388 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 DNAJC18Q9H819 358 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 VDAC3Q9Y277 283 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 CLDN7O95471 211 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 C6orf47O95873 294 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 ABCD3P28288 659 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 GLO1Q04760 184 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 FAM58AQ8N1B3 248 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 PRR36Q9H6K5 1346 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 ARPC4-TTLL3A0A0A6YYG9 625 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 TMEM221A6NGB7 291 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 ZNF705EA8MWA4 302 aaPredicted RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 M0R296 226 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 SRPX2O60687 465 aaPredicted RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 FGF3P11487 239 aaPredicted RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 APEX1P27695 318 aaKnown RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 LGALS7P47929 136 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 MNX1P50219 401 aaPredicted RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 EARS2Q5JPH6 523 aaKnown RBP3.23□□□□□ -1.89
NEB-201ENST00000172853 ZNF793Q6ZN11 406 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 ARFGAP1Q8N6T3 406 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 MYADMQ96S97 322 aa3.23□□□□□ -1.89
NEB-201ENST00000172853 TRBV23-1A0A0A0MS06 115 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 B4GALT5O43286 388 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 H2AFB2P0C5Z0 115 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 AZGP1P25311 298 aaKnown RBP3.22□□□□□ -1.89
NEB-201ENST00000172853 PRRX1P54821 245 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 LILRA4P59901 499 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 WDR5P61964 334 aaKnown RBP3.22□□□□□ -1.89
NEB-201ENST00000172853 YPEL5P62699 121 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 RPL30P62888 115 aaKnown RBP3.22□□□□□ -1.89
NEB-201ENST00000172853 EDDM3AQ14507 147 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 KCNMB1Q16558 191 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 CYP4V2Q6ZWL3 525 aaPredicted RBP3.22□□□□□ -1.89
NEB-201ENST00000172853 SLC36A1Q7Z2H8 476 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 ZNF781Q8N8C0 355 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 SPOCK2Q92563 424 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 DPH7Q9BTV6 452 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 CHRNA10Q9GZZ6 450 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 CCDC187A0A096LP49 1063 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 OR5AC1P0C628 307 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 CTSAP10619 480 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 EDN3P14138 238 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 BMP6P22004 513 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 IRS1P35568 1242 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 FNTBP49356 437 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 RELBQ01201 579 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 OPCMLQ14982 345 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 SIX1Q15475 284 aaPredicted RBP3.22□□□□□ -1.89
NEB-201ENST00000172853 IER5LQ5T953 404 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 LSMEM1Q8N8F7 131 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 OR13C5Q8NGS8 318 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 OR13C2Q8NGS9 318 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 TMEM203Q969S6 136 aa3.22□□□□□ -1.89
NEB-201ENST00000172853 TMIGD2Q96BF3 282 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms