RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ZMYND19Q96E35 227 aaPredicted RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 ZC3HAV1LQ96H79 300 aaKnown RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 ERMAPQ96PL5 475 aaPredicted RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 TIMP4Q99727 224 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 ZNF559Q9BR84 538 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 ZNF576Q9H609 170 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 NIPAL2Q9H841 368 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 SATB2Q9UPW6 733 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 EXOGQ9Y2C4 368 aaKnown RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 CIB4A0PJX0 185 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 C4orf47A7E2U8 309 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 FAM171A2A8MVW0 826 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 CHP2O43745 196 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 NKX2-2O95096 273 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 RCBTB2O95199 551 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 IGHA1P01876 353 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 SNRPBP14678 240 aaKnown RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 PRKACBP22694 351 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 NAA10P41227 235 aaPredicted RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 ACAA2P42765 397 aaKnown RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 CCR4P51679 360 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 KIRREL2Q6UWL6 708 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 SSX6Q7RTT6 188 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 PRSS58Q8IYP2 241 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 C9orf62Q8N4C0 152 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 OR11H4Q8NGC9 324 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 KISS1RQ969F8 398 aaPredicted RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 OMA1Q96E52 524 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 C4orf36Q96KX1 117 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 DPCDQ9BVM2 203 aaPredicted RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 GTPBP2Q9BX10 602 aaKnown RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 ISYNA1Q9NPH2 558 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 CA14Q9ULX7 337 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 CACNG2Q9Y698 323 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 PSMD9O00233 223 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 SLC19A2O60779 497 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 MT-ND4P03905 459 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 MAP3K8P41279 467 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 PITPNBP48739 271 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 TIGD3Q6B0B8 471 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 SFXN4Q6P4A7 337 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 METAP1DQ6UB28 335 aaPredicted RBP12.06□□□□□ -0.48
CTNS-201ENST00000046640 HEATR5AQ86XA9 2040 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 CCDC28AQ8IWP9 274 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 LNX2Q8N448 690 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 FAM98AQ8NCA5 519 aaKnown RBP12.06□□□□□ -0.48
CTNS-201ENST00000046640 OR5M3Q8NGP4 307 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 HSD17B8Q92506 261 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 SLC38A3Q99624 504 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 PRTFDC1Q9NRG1 225 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 MED17Q9NVC6 651 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 DNAJB12Q9NXW2 375 aaKnown RBP12.06□□□□□ -0.48
CTNS-201ENST00000046640 PCDH15Q96QU1 1955 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 FRYLO94915 3013 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 A0A0B4J2E0 115 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 TEX13CA0A0J9YWL9 993 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 A0A1B0GX12 115 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 RIIAD1A6NNX1 92 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 LEUTXA8MZ59 168 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 WNT1P04628 370 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 MYF5P13349 255 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 SLC6A1P30531 599 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 PYCR1P32322 319 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 DGCR2P98153 550 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 GARNL3Q5VVW2 1013 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 ZNF321PQ8N8H1 164 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 C16orf52Q8NHV5 167 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 DGAT2Q96PD7 388 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 SPRTNQ9H040 489 aaPredicted RBP12.06□□□□□ -0.48
CTNS-201ENST00000046640 ING4Q9UNL4 249 aa12.06□□□□□ -0.48
CTNS-201ENST00000046640 A0A1W2PPC4 97 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 OR5K4A6NMS3 321 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 FZD7O75084 574 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 DHFRP00374 187 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 RNH1P13489 461 aaKnown RBP12.05□□□□□ -0.48
CTNS-201ENST00000046640 ENPP1P22413 925 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 GRPRP30550 384 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 RPL4P36578 427 aaKnown RBP12.05□□□□□ -0.48
CTNS-201ENST00000046640 TP53I3Q53FA7 332 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 CREB3L1Q96BA8 519 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 KCNN2Q9H2S1 579 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 NARFLQ9H6Q4 476 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 CMC2Q9NRP2 79 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 RPS6KB2Q9UBS0 482 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 ZNF346Q9UL40 294 aaKnown RBP12.05□□□□□ -0.48
CTNS-201ENST00000046640 SPEF1Q9Y4P9 236 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 IER3IP1Q9Y5U9 82 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 IGHV5-51A0A0C4DH38 117 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 C17orf51A8MQB3 221 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 AHCYP23526 432 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 STOMP27105 288 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 OR1D4P47884 311 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 GAS6Q14393 721 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 EXOSC6Q5RKV6 272 aaKnown RBP12.05□□□□□ -0.48
CTNS-201ENST00000046640 HBMQ6B0K9 141 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 SFRP4Q6FHJ7 346 aaPredicted RBP12.05□□□□□ -0.48
CTNS-201ENST00000046640 TMPRSS11FQ6ZWK6 438 aa12.05□□□□□ -0.48
CTNS-201ENST00000046640 CREB3L2Q70SY1 520 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms