RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 UGT2A1Q9Y4X1 527 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 CEP295Q9C0D2 2601 aa11.13□□□□□ -0.63
CHPF2-201ENST00000035307 M0R082 166 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SSX4O60224 188 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 C4BPBP20851 252 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 PLXNA3P51805 1871 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 GPR143P51810 404 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 CCL7P80098 99 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 GBX1Q14549 363 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 MYLKQ15746 1914 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 TATDN3Q17R31 274 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 MPEG1Q2M385 716 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 UBE3DQ7Z6J8 389 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 GHSRQ92847 366 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 ATG5Q9H1Y0 275 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SLC52A3Q9NQ40 469 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 ING1Q9UK53 422 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SESN1Q9Y6P5 492 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 FRMPD3Q5JV73 1810 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 VPS13AQ96RL7 3174 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 ZAR1LA6NP61 321 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 C4orf51C9J302 202 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 TEX46H3BTG2 121 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 LGI1O95970 557 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 PGAM2P15259 253 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 ITGA3P26006 1051 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 STOMP27105 288 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 GIFP27352 417 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 HSD11B1P28845 292 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 CAPZBP47756 277 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 HSF2Q03933 536 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 PDE7AQ13946 482 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 P2RY14Q15391 338 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 OR7E24Q6IFN5 339 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SLC16A12Q6ZSM3 486 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 PPP1R3BQ86XI6 285 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 TM9SF4Q92544 642 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 TCTN2Q96GX1 697 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 TMEM41AQ96HV5 264 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 Q96M85 177 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 OR2A5Q96R48 311 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SDF2Q99470 211 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 MROQ9BYG7 248 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 RNF121Q9H920 327 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 CPNE5Q9HCH3 593 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 WASH6PQ9NQA3 447 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 DOCK7Q96N67 2140 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 CDHR4A6H8M9 788 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 TLCD2A6NGC4 264 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF726A6NNF4 738 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 PRAMEF2O60811 474 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 KDM4BO94953 1096 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SCG5P05408 212 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 GTF2F2P13984 249 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SSTR2P30874 369 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 GRK5P34947 590 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 FGFBP1Q14512 234 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SF3A2Q15428 464 aaKnown RBP11.12□□□□□ -0.63
CHPF2-201ENST00000035307 NR0B2Q15466 257 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 SGCAQ16586 387 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 NKPD1Q17RQ9 610 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 TCTE1Q5JU00 501 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 FCRL6Q6DN72 434 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 LANCL3Q6ZV70 420 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 KCTD9Q7L273 389 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 PRSS45Q7RTY3 260 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 ABI3BPQ7Z7G0 1075 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 DIO2Q92813 273 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 GCDHQ92947 438 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-201ENST00000035307 FYTTD1Q96QD9 318 aaKnown RBP11.12□□□□□ -0.63
CHPF2-201ENST00000035307 DPCDQ9BVM2 203 aaPredicted RBP11.12□□□□□ -0.63
CHPF2-201ENST00000035307 ZMAT3Q9HA38 289 aaKnown RBP11.12□□□□□ -0.63
CHPF2-201ENST00000035307 APMAPQ9HDC9 416 aa11.12□□□□□ -0.63
CHPF2-201ENST00000035307 C13orf42A0A1B0GVH6 325 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 PDCD5O14737 125 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SEC14L5O43304 696 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 POU2F2P09086 479 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SPEM2Q0P670 501 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 RASSF6Q6ZTQ3 369 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 MEPCEQ7L2J0 689 aaKnown RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 C1orf210Q8IVY1 113 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SLC35F2Q8IXU6 374 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 TMEM52Q8NDY8 209 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 OR2AJ1Q8NGZ0 328 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 RNASE11Q8TAA1 199 aaKnown RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SLC35B4Q969S0 331 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 CCDC120Q96HB5 630 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 OR14A2Q96R54 314 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 LPAR4Q99677 370 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 C11orf54Q9H0W9 315 aaPredicted RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 MOV10Q9HCE1 1003 aaKnown RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 KDM4EB2RXH2 506 aaPredicted RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SPNP16150 400 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 DPY19L4Q7Z388 723 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 GPALPP1Q8IXQ4 340 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 OR4D11Q8NGI4 311 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 OPALINQ96PE5 141 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms