RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CAPZA2P47755 286 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 POLR2HP52434 150 aaKnown RBP13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 LTBQ06643 244 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 GPR50Q13585 617 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 IL10RAQ13651 578 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 GGTLC2Q14390 218 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 CD200R1LQ6Q8B3 271 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 LYPD8Q6UX82 237 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 GRINAQ7Z429 371 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 LHFPL3Q86UP9 236 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 SLC15A4Q8N697 577 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 MCFD2Q8NI22 146 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 RHBDD1Q8TEB9 315 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 GATAD2BQ8WXI9 593 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 NACC2Q96BF6 587 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 OTULINQ96BN8 352 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 CDADC1Q9BWV3 514 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 NMNAT2Q9BZQ4 307 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 ADGRL4Q9HBW9 690 aa13.02□□□□□ -0.32
RTFDC1-201ENST00000023939 TRAV36DV7A0A075B6V5 113 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 A0A1W2PQ72 361 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 LNP1A1A4G5 178 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 C12orf71A8MTZ7 269 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 C9J4A7 227 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 ZNF670-ZNF695F2Z2N8 137 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 SCO2O43819 266 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 GDF9O60383 454 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 NPIPB7O75200 414 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 MT-ATP6P00846 226 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 CD14P08571 375 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 CXCR1P25024 350 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 GABRA5P31644 462 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 RPL4P36578 427 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 HTR3AP46098 478 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 RPS3AP61247 264 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 ACTC1P68032 377 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 ACTA1P68133 377 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 C17orf67Q0P5P2 114 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 GALEQ14376 348 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 PCOLCEQ15113 449 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 QPRTQ15274 297 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 TOMM34Q15785 309 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 KLHL12Q53G59 568 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 EMC4Q5J8M3 183 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 C5orf46Q6UWT4 87 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 MFSD4AQ8N468 514 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 ELP5Q8TE02 316 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 ATOH1Q92858 354 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 KTI12Q96EK9 354 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 MOGAT1Q96PD6 335 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 DEPDC7Q96QD5 511 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 TIMP4Q99727 224 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 CMKLR1Q99788 373 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 COQ7Q99807 217 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 OR51V1Q9H2C8 321 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 SLC39A1Q9NY26 324 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 AKAP7Q9P0M2 348 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 MYOTQ9UBF9 498 aa13.02□□□□□ -0.33
RTFDC1-201ENST00000023939 COL27A1Q8IZC6 1860 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 IGLV3-32A0A0A0MS00 114 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 ANKUB1A6NFN9 424 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 KLF7O75840 302 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 BGLAPP02818 100 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 CD63P08962 238 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 GALP22466 123 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 FGF9P31371 208 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 CD79BP40259 229 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 FBXW4P57775 412 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 LGALS3BPQ08380 585 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 FCRLBQ6BAA4 426 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 C16orf47Q6ZP98 133 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 FAM122BQ7Z309 247 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 ZBTB46Q86UZ6 589 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 POMGNT2Q8NAT1 580 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 CYB561A3Q8NBI2 242 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 FAM98AQ8NCA5 519 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 OR6S1Q8NH40 331 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 OR4K13Q8NH42 304 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 MOSPD2Q8NHP6 518 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 SLC22A8Q8TCC7 542 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 STK35Q8TDR2 534 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 DUSP19Q8WTR2 217 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 TMEM234Q8WY98 164 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 ST8SIA1Q92185 356 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 MR1Q95460 341 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 ASPNQ9BXN1 380 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 ULBP3Q9BZM4 244 aa13.01□□□□□ -0.33
RTFDC1-201ENST00000023939 ZNF700Q9H0M5 742 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms