RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Zfp282E9PVC2 666 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Nr4a1P12813 601 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp59P16373 634 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Hsd3b3P26150 373 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 SnrpbP27048 231 aaKnown RBP15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc11a1P41251 548 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 ptchd1Q14B62 888 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Gpr68Q8BFQ3 365 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Shisa7Q8C3Q5 558 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr63Q8VBW9 316 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Hyal3Q8VEI3 412 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Laptm4bQ91XQ6 227 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Chmp1b1Q99LU0 199 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Mrpl15Q9CPR5 295 aaKnown RBP15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 EcdQ9CS74 641 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm1330D3Z460 184 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 1700080E11RikE9Q9G1 206 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr574F8VQ18 346 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 B3galt2O54905 422 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Pcdh12O55134 1180 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Cacng2O88602 323 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Acp2P24638 423 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr6P34986 316 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Nup43P59235 380 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Ptp4a1Q63739 173 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 D11Wsu47eQ6PIX9 558 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Utp15Q8C7V3 528 aaKnown RBP15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Klf11Q8K1S5 502 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Ttc36Q8VBW8 186 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr160Q8VGE3 309 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 PnpoQ91XF0 261 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Arfgap1Q9EPJ9 414 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 P2ry14Q9ESG6 338 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Nox4Q9JHI8 578 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Lbx2Q9WUN8 195 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc7a5Q9Z127 512 aa15.21■□□□□ 0.02
Shh-201ENSMUST00000002708 Vmn2r108E9PYS0 855 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 F10O88947 481 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc9a3r1P70441 355 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Cmklr1P97468 371 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Xkr7Q5GH64 580 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Serinc4Q5XK03 492 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr12Q60894 333 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Laptm5Q61168 261 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Gas6Q61592 674 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Zfand1Q8BFR6 268 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Cdkl3Q8BLF2 595 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Dusp15Q8R4V2 235 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Bcl7bQ921K9 202 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 NaxdQ9CZ42 343 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Scn2aA0A0J9YTW6 2006 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Actl10A2AKE7 346 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 H2-ObO35424 271 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Sp3O70494 783 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Tead1P30051 426 aaKnown RBP15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 FahP35505 419 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Tbx4P70325 552 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 St3gal3P97325 374 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Garem1Q3UFT3 876 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 DgkzQ80UP3 929 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Rcc2Q8BK67 520 aaKnown RBP15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 V1ra11Q8R2E6 318 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Med9Q8VCS6 142 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1048Q8VGS2 320 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Vmn1r45Q8VIC7 318 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Adamdec1Q9R0X2 467 aa15.2■□□□□ 0.02
Shh-201ENSMUST00000002708 Skint8A7XV07 398 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Dbx2F8VQH7 377 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Socs1O35716 212 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Il2raP01590 268 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Actr1aP61164 376 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 SpicQ6P3D7 242 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Mrps7Q80X85 242 aaKnown RBP15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Mnd1Q8K396 205 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Tsen15Q8R3W5 168 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Actr1bQ8R5C5 376 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr98Q8VFD9 309 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1390Q8VGW9 311 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Tada1Q99LM9 335 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc24a3Q99PD7 645 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Get4Q9D1H7 327 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Mgat4cQ9D306 478 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Dnaja4Q9JMC3 397 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Xpr1Q9Z0U0 695 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Ttc39aA2ACP1 578 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Fam84bD3YXJ5 310 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 UoxP25688 303 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Thbs1P35441 1170 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Egfbp2P36368 261 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Gstm5P48774 224 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Nkx6-3Q3UHX8 262 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc25a21Q8BZ09 298 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Anapc10Q8K2H6 185 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Wdr45bQ9CR39 344 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Mrpl14Q9D1I6 145 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Fgf21Q9JJN1 210 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Syt8Q9R0N6 395 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 CalcrlQ9R1W5 463 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Bex2Q9WTZ8 129 aa15.19■□□□□ 0.02
Shh-201ENSMUST00000002708 Zfp989H3BLB0 661 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 80.1 ms