RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TMEM44Q2T9K0 475 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 RPUSD3Q6P087 351 aaKnown RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 PRICKLE2Q7Z3G6 844 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 CDK20Q8IZL9 346 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 RNF113BQ8IZP6 322 aaKnown RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 GALNT4Q8N4A0 578 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 MAGEE2Q8TD90 523 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 NRG4Q8WWG1 115 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 DDIT4LQ96D03 193 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 FAM46AQ96IP4 442 aaKnown RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 FEVQ99581 238 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 TMEM43Q9BTV4 400 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 KLHL4Q9C0H6 718 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 SLC25A18Q9H1K4 315 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 SMURF2Q9HAU4 748 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 C20orf141Q9NUB4 165 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 ZNF337Q9Y3M9 751 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 PIEZO2Q9H5I5 2752 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 SOCS2O14508 198 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 EI24O14681 340 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 GASTP01350 101 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 ELK4P28324 431 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 GPR4P46093 362 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 RPS5P46782 204 aaKnown RBP15.77■□□□□ 0.12
PHGDH-230ENST00000641927 B3GALT5-AS1P59052 145 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 IL1RL1Q01638 556 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 EGR4Q05215 589 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 INAQ16352 499 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 OGFRL1Q5TC84 451 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-230ENST00000641927 PGBD2Q6P3X8 592 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 GTPBP3Q969Y2 492 aaKnown RBP15.77■□□□□ 0.12
PHGDH-230ENST00000641927 BPIFA2Q96DR5 249 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 KTI12Q96EK9 354 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-230ENST00000641927 SLC19A3Q9BZV2 496 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 ZDHHC11Q9H8X9 412 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 ZNF556Q9HAH1 456 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 ACKR4Q9NPB9 350 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 MEPEQ9NQ76 525 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-230ENST00000641927 LIPGQ9Y5X9 500 aa15.77■□□□□ 0.12
PHGDH-230ENST00000641927 MAP1BP46821 2468 aaKnown RBP15.77■□□□□ 0.12
PHGDH-230ENST00000641927 ENO4A6NNW6 628 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ZNF208O43345 1280 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 AHSA1O95433 338 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 SFTPCP11686 197 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 POU3F2P20265 443 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 MAP2K6P52564 334 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 LY6DQ14210 128 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 SYT14P1Q58G82 188 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ANKRD34AQ69YU3 496 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ZNF770Q6IQ21 691 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 FAM180AQ6UWF9 173 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ZER1Q7Z7L7 766 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 SLC25A43Q8WUT9 341 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 OR5B2Q96R09 309 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 SLC29A1Q99808 456 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 RBM4BQ9BQ04 359 aaKnown RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 RBM4Q9BWF3 364 aaKnown RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 VCX3BQ9H321 246 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 MGAT4BQ9UQ53 548 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 FREM3P0C091 2139 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 TRGV5A0A0B4J1U4 118 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ARRDC5A6NEK1 342 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 NPIPA5E9PKD4 350 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ERVH48-1M5A8F1 160 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 CH25HO95992 272 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 CRYABP02511 175 aaKnown RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 SAGP10523 405 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ANXA8P13928 327 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 GFRA1P56159 465 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 RAC1P63000 192 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 PRKCDQ05655 676 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 DAG1Q14118 895 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 TMEM176BQ3YBM2 270 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-230ENST00000641927 CMPK2Q5EBM0 449 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 C1orf140Q5VVS0 124 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 C1QL3Q5VWW1 255 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 UBQLNLQ8IYU4 475 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 STK35Q8TDR2 534 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 SLC25A36Q96CQ1 311 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 ARL5BQ96KC2 179 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 NIPSNAP1Q9BPW8 284 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 GABARAPL1Q9H0R8 117 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 VCXQ9H320 206 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 NPIPA1Q9UND3 350 aa15.76■□□□□ 0.11
PHGDH-230ENST00000641927 TRAV36DV7A0A075B6V5 113 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 GJE1A6NN92 205 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 LINC01387J3KSC0 135 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 SEC14L5O43304 696 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 CBLP22681 906 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 CHMP24386 653 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 SHC1P29353 583 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 OMPP47874 163 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 STARP49675 285 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 C1orf94Q6P1W5 598 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 C5orf46Q6UWT4 87 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 Q8NA96 180 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 GNPDA2Q8TDQ7 276 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 TAAR8Q969N4 342 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 SGTBQ96EQ0 304 aa15.75■□□□□ 0.11
PHGDH-230ENST00000641927 OSBPL10Q9BXB5 764 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms