RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 GPR83Q9NYM4 423 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 TVP23BQ9NYZ1 205 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 CRNNQ9UBG3 495 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 PPIEQ9UNP9 301 aaKnown RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 DIMT1Q9UNQ2 313 aaKnown RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 FARSAQ9Y285 508 aaKnown RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 TRAPPC4Q9Y296 219 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM5Q9Y2B1 443 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 HS3ST3B1Q9Y662 390 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 PIEZO1Q92508 2521 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 A0A1W2PNU3 283 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 LOC110117498-PIK3R3F6TDL0 507 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 MAGEB3O15480 346 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 ADAM11O75078 769 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 OR2J2O76002 312 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 LYPD3O95274 346 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 PTHP01270 115 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 CELA2AP08217 269 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 RAB40ALP0C0E4 278 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 SAGP10523 405 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 GP1BBP13224 206 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 FPR3P25089 353 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 C21orf33P30042 268 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 S100A5P33763 92 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 ADH7P40394 386 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 TMED10P49755 219 aaKnown RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 SMSP52788 366 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 EFNB1P98172 346 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 CDK5Q00535 292 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF117Q03924 483 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 MLLT11Q13015 90 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 SKP2Q13309 424 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 DNASE1L3Q13609 305 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 C1DQ13901 141 aaKnown RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 CLEC12AQ5QGZ9 265 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 FNDC7Q5VTL7 733 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 WBP2NLQ6ICG8 309 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 POMZP3Q6PJE2 187 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 CBLN3Q6UW01 205 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF517Q6ZMY9 492 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 RASSF6Q6ZTQ3 369 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 NDUFAF7Q7L592 441 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 KIF18BQ86Y91 864 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 MARCH9Q86YJ5 346 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 C10orf53Q8N6V4 93 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 CLDN22Q8N7P3 220 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 POGLUT1Q8NBL1 392 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 NLGN4YQ8NFZ3 816 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 M1APQ8TC57 530 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 DNAJA4Q8WW22 397 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 OSTF1Q92882 214 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 FGF11Q92914 225 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 BPIFA2Q96DR5 249 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM80Q96HE8 168 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 IL4I1Q96RQ9 567 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 MGLLQ99685 303 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 GPA33Q99795 319 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 NEURL2Q9BR09 285 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 CDADC1Q9BWV3 514 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 JAM3Q9BX67 310 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 TSSK6Q9BXA6 273 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 EXOSC3Q9NQT5 275 aaKnown RBP8.09□□□□□ -1.11
PHGDH-219ENST00000641513 MED17Q9NVC6 651 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 NDUFB11Q9NX14 153 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 KLRF1Q9NZS2 232 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 MYOTQ9UBF9 498 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 TCFL5Q9UL49 500 aa8.09□□□□□ -1.11
PHGDH-219ENST00000641513 SPEGQ15772 3267 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 FREM3P0C091 2139 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 A0A1W2PQD3 144 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 TMEM129A0AVI4 362 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 SLC35F4A4IF30 521 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 C2orf72A6NCS6 295 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 ALG1L2C9J202 215 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 SOCS6O14544 535 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 FADS1O60427 444 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 CDC40O60508 579 aaKnown RBP eCLIP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 EIF4E2O60573 245 aaKnown RBP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 RAD1O60671 282 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 ZNF354AO60765 605 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 TP53P04637 393 aaPredicted RBP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 NGFRP08138 427 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 DBTP11182 482 aaKnown RBP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 FUT1P19526 365 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 PGCP20142 388 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 MAKP20794 623 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 RBMS1P29558 406 aaKnown RBP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 RBM34P42696 430 aaKnown RBP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 PCYT1AP49585 367 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 NUDT6P53370 316 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 GABREP78334 506 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 ZNF91Q05481 1191 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 CRYZQ08257 329 aaKnown RBP8.08□□□□□ -1.12
PHGDH-219ENST00000641513 RAB40BQ12829 278 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 ATP1A4Q13733 1029 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 CBFBQ13951 182 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 SSPNQ14714 243 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 SNAPC1Q16533 368 aa8.08□□□□□ -1.12
PHGDH-219ENST00000641513 KLHL22Q53GT1 634 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms