RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	HDHD5	Q9BXW7	423 aa		12.72	□□□□□ -0.37
SDHD-209	ENST00000640554	OR10A4	Q9H209	315 aa		12.72	□□□□□ -0.37
SDHD-209	ENST00000640554	PIF1	Q9H611	641 aa		12.72	□□□□□ -0.37
SDHD-209	ENST00000640554	CRIM1	Q9NZV1	1036 aa		12.72	□□□□□ -0.37
SDHD-209	ENST00000640554	RPS6KB2	Q9UBS0	482 aa		12.72	□□□□□ -0.37
SDHD-209	ENST00000640554	EDAR	Q9UNE0	448 aa		12.72	□□□□□ -0.37
SDHD-209	ENST00000640554	PCNX3	Q9H6A9	2034 aa		12.72	□□□□□ -0.37
SDHD-209	ENST00000640554	PKDREJ	Q9NTG1	2253 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	IGKV3D-15	A0A087WSY6	115 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	FAM221A	A4D161	298 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554		M0QX08	132 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	CNOT4	O95628	575 aa	Known RBP	12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	GPI	P06744	558 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	PNMT	P11086	282 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	LSP1	P33241	339 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	CPOX	P36551	454 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	OR2B6	P58173	313 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	H3F3A	P84243	136 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	VMAC	Q2NL98	169 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	FAM91A1	Q658Y4	838 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	REP15	Q6BDI9	236 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	CCDC80	Q76M96	950 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	ABHD3	Q8WU67	409 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	CMTM5	Q96DZ9	223 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	LURAP1	Q96LR2	239 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	HOPX	Q9BPY8	73 aa	Predicted RBP	12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	EFCAB1	Q9HAE3	211 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	SELENON	Q9NZV5	590 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	TES	Q9UGI8	421 aa	Known RBP	12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	CLEC4A	Q9UMR7	237 aa		12.71	□□□□□ -0.37
SDHD-209	ENST00000640554	ITPR2	Q14571	2701 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	DOCK7	Q96N67	2140 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	TMEM72	A0PK05	275 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	SH3D21	A4FU49	640 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554		A6NNC1	897 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	FXYD1	O00168	92 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	SMAD9	O15198	467 aa	Known RBP	12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	SNX3	O60493	162 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	FMO6P	O60774	539 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	CTAG2	O75638	210 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	IFNA14	P01570	189 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	FES	P07332	822 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	PRG2	P13727	222 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	CCNA2	P20248	432 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	IDUA	P35475	653 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	UGT2B10	P36537	528 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	GZMM	P51124	257 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	SLC16A1	P53985	500 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	SEC24C	P53992	1094 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	NCALD	P61601	193 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	FAM27E3	Q08E93	113 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	SELPLG	Q14242	412 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	CAPRIN1	Q14444	709 aa	Known RBP	12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	P2RY6	Q15077	328 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	ULK3	Q6PHR2	472 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	PAQR6	Q6TCH4	344 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	C6orf89	Q6UWU4	347 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	GALNT5	Q7Z7M9	940 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	RANBP3L	Q86VV4	465 aa	Predicted RBP	12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	CALHM3	Q86XJ0	350 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	TUSC5	Q8IXB3	177 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	ZZZ3	Q8IYH5	903 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	OR52E4	Q8NGH9	312 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	SLC26A7	Q8TE54	656 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	C3orf49	Q96BT1	292 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	ARL5B	Q96KC2	179 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	PSD2	Q9BQI7	771 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	TAPBPL	Q9BX59	468 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	OR11A1	Q9GZK7	315 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	TMEM27	Q9HBJ8	222 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	PARPBP	Q9NWS1	579 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	ZNF226	Q9NYT6	803 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	GPR52	Q9Y2T5	361 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	NAV2	Q8IVL1	2488 aa		12.7	□□□□□ -0.38
SDHD-209	ENST00000640554	HCFC1	P51610	2035 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	INTS1	Q8N201	2190 aa	Known RBP	12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	ELOA3D	A6NLF2	546 aa	Predicted RBP	12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	OR2T1	O43869	369 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	TPST1	O60507	370 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	VAMP5	O95183	116 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	LGI1	O95970	557 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	COX4I1	P13073	169 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	PSMB1	P20618	241 aa	Known RBP	12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	FPR1	P21462	350 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	AQP1	P29972	269 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	PRDX6	P30041	224 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	RGS8	P57771	180 aa	Predicted RBP	12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	ELOA3B	Q3SY89	546 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	SWT1	Q5T5J6	900 aa	Known RBP	12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	ABLIM2	Q6H8Q1	611 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	HACD2	Q6Y1H2	254 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	SSX8	Q7RTT4	187 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	ATG4D	Q86TL0	474 aa	Predicted RBP	12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	ELOA3	Q8NG57	546 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	LINC01560	Q8TB33	94 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	SLC47A1	Q96FL8	570 aa		12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	SF3B5	Q9BWJ5	86 aa	Known RBP	12.69	□□□□□ -0.38
SDHD-209	ENST00000640554	RASSF1	Q9NS23	344 aa		12.69	□□□□□ -0.38

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