RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 RPA2P15927 270 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 HMGB2P26583 209 aaKnown RBP3.6□□□□□ -1.83
RTTN-217ENST00000640393 PRDX3P30048 256 aaKnown RBP3.6□□□□□ -1.83
RTTN-217ENST00000640393 CSTF1Q05048 431 aaKnown RBP3.6□□□□□ -1.83
RTTN-217ENST00000640393 KLHL30Q0D2K2 578 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 MFSD6LQ8IWD5 586 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 CNPY4Q8N129 248 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 FAM71E2Q8N5Q1 922 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 PIGCQ92535 297 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 MRPS31Q92665 395 aaKnown RBP3.6□□□□□ -1.83
RTTN-217ENST00000640393 PELI1Q96FA3 418 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 KCNA7Q96RP8 456 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 RIBC2Q9H4K1 309 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 PLGRKTQ9HBL7 147 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 RAB18Q9NP72 206 aa3.6□□□□□ -1.83
RTTN-217ENST00000640393 PRG3Q9Y2Y8 225 aaPredicted RBP3.6□□□□□ -1.83
RTTN-217ENST00000640393 PHF3Q92576 2039 aaKnown RBP3.6□□□□□ -1.83
RTTN-217ENST00000640393 IGHV3OR16-13A0A075B7E8 117 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 TRDCB7Z8K6 153 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 DCTN6O00399 190 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 RGS16O15492 202 aaPredicted RBP3.59□□□□□ -1.83
RTTN-217ENST00000640393 CXCL13O43927 109 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 STAMBPO95630 424 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 UGT2B4P06133 528 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 CXCR2P25025 360 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 GCAP28676 217 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 SHMT2P34897 504 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 ELP6Q0PNE2 266 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 PDK4Q16654 411 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 GPRC6AQ5T6X5 926 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 Q6P435 159 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 TMIGD1Q6UXZ0 262 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 OR4K14Q8NGD5 310 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 OR2T34Q8NGX1 318 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 BRSK1Q8TDC3 778 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 MAIP1Q8WWC4 291 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 C7orf34Q96L11 122 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 OMDQ99983 421 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 ALG12Q9BV10 488 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 CGNQ9P2M7 1197 aaKnown RBP3.59□□□□□ -1.83
RTTN-217ENST00000640393 ZNF225Q9UK10 706 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 MEMO1Q9Y316 297 aa3.59□□□□□ -1.83
RTTN-217ENST00000640393 ZNFX1Q9P2E3 1918 aaKnown RBP3.59□□□□□ -1.84
RTTN-217ENST00000640393 TRBV6-6A0A0A6YYG2 114 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 A0A1B0GWJ7 208 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 A0A1W2PNV4 684 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 RTL8CO15255 209 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 KIAA0754O94854 1291 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 IGKV3-11P04433 115 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 RCC1P18754 421 aaPredicted RBP3.58□□□□□ -1.84
RTTN-217ENST00000640393 RPS14P62263 151 aaKnown RBP3.58□□□□□ -1.84
RTTN-217ENST00000640393 SLC15A2Q16348 729 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 KLF17Q5JT82 389 aaPredicted RBP3.58□□□□□ -1.84
RTTN-217ENST00000640393 TIGD3Q6B0B8 471 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 CES3Q6UWW8 571 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 SYT10Q6XYQ8 523 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 RALGPS2Q86X27 583 aaPredicted RBP3.58□□□□□ -1.84
RTTN-217ENST00000640393 TMEM123Q8N131 208 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 CATSPER1Q8NEC5 780 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 OR1F12Q8NHA8 337 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 RSPH1Q8WYR4 309 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 SLC35E1Q96K37 410 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 CCNL2Q96S94 520 aaPredicted RBP3.58□□□□□ -1.84
RTTN-217ENST00000640393 SECISBP2Q96T21 854 aaKnown RBP3.58□□□□□ -1.84
RTTN-217ENST00000640393 ZNF670Q9BS34 389 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 SLC25A39Q9BZJ4 359 aaPredicted RBP3.58□□□□□ -1.84
RTTN-217ENST00000640393 FOLH1BQ9HBA9 442 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 NUDT15Q9NV35 164 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 KLK12Q9UKR0 248 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 SNX6Q9UNH7 406 aa3.58□□□□□ -1.84
RTTN-217ENST00000640393 MTCL1Q9Y4B5 1905 aaKnown RBP3.57□□□□□ -1.84
RTTN-217ENST00000640393 METTL21EPA6NDL7 271 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 FAM166BA8MTA8 275 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 FAM189A1O60320 539 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 DFNA5O60443 496 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 PFKFB2O60825 505 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 GUCA1CO95843 209 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 MMP1P03956 469 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 LGALS2P05162 132 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 CCDC130P13994 396 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 DESP17661 470 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 HNF1AP20823 631 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 MMP11P24347 488 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 PSMA5P28066 241 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 CALCRP30988 508 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 SOX6P35712 828 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 VDAC2P45880 294 aaPredicted RBP3.57□□□□□ -1.84
RTTN-217ENST00000640393 TDO2P48775 406 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
RTTN-217ENST00000640393 PKNOX1P55347 436 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 TAS2R19P59542 299 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 NRF1Q16656 503 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 BCL7AQ4VC05 210 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 Q6ZN92 141 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 SLC35F2Q8IXU6 374 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 HTR3CQ8WXA8 447 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 ARPC1AQ92747 370 aa3.57□□□□□ -1.84
RTTN-217ENST00000640393 RNF167Q9H6Y7 350 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms