RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 NR2F1P10589 423 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 EDNRAP25101 427 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 SLC1A6P48664 564 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 NME5P56597 212 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 COPZ1P61923 177 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 KRTAP1-1Q07627 177 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 LRRC74AQ0VAA2 488 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 FAM174BQ3ZCQ3 159 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 SPANXN4Q5MJ08 99 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 ZNF544Q6NX49 715 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 SEZ6L2Q6UXD5 910 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 C17orf78Q8N4C9 275 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 FAM71CQ8NEG0 241 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 FAM168AQ92567 244 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
TARDBP-231ENST00000639599 INPP5KQ9BT40 448 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 TAPBPLQ9BX59 468 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 KCNK9Q9NPC2 374 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 TRAPPC4Q9Y296 219 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-231ENST00000639599 TMED7Q9Y3B3 224 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 SLC25A15Q9Y619 301 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 FKBP7Q9Y680 259 aa12.93□□□□□ -0.34
TARDBP-231ENST00000639599 NIPBLQ6KC79 2804 aaeCLIP12.93□□□□□ -0.34
TARDBP-231ENST00000639599 TMEM247A6NEH6 219 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 CFAP73A6NFT4 308 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 E7EQL1 145 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 TM9SF1O15321 606 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 ZNF208O43345 1280 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 ITM2AO43736 263 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 TYROBPO43914 113 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 CD8AP01732 235 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 CREB1P16220 341 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 SLC25A16P16260 332 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 CDH2P19022 906 aaPredicted RBP12.92□□□□□ -0.34
TARDBP-231ENST00000639599 CXCR1P25024 350 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 TACR3P29371 465 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 MAP2K6P52564 334 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 SLC16A1P53985 500 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 SPOCK1Q08629 439 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 STX3Q13277 289 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 ZNF621Q6ZSS3 439 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 RNF130Q86XS8 419 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 ADGRG3Q86Y34 549 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 HIPK1Q86Z02 1210 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 PEX5LQ8IYB4 626 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 ZNF440Q8IYI8 595 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 C1orf162Q8NEQ5 155 aaPredicted RBP12.92□□□□□ -0.34
TARDBP-231ENST00000639599 OR52E4Q8NGH9 312 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 TMEM158Q8WZ71 300 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 TRNT1Q96Q11 434 aaKnown RBP12.92□□□□□ -0.34
TARDBP-231ENST00000639599 KCNK17Q96T54 332 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 SAP130Q9H0E3 1048 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 DCTN4Q9UJW0 460 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 CDC42EP3Q9UKI2 254 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 USF3Q68DE3 2245 aa12.92□□□□□ -0.34
TARDBP-231ENST00000639599 IGHV4-30-2A0A087WSY4 118 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 CLDN24A6NM45 220 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 KRT75O95678 551 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 GPIP06744 558 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 DBIP07108 87 aaKnown RBP12.91□□□□□ -0.34
TARDBP-231ENST00000639599 ETV4P43268 484 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 PRPS1P60891 318 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 IRX1P78414 480 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-231ENST00000639599 CASP8Q14790 479 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 GABRA6Q16445 453 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 OTUD3Q5T2D3 398 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-231ENST00000639599 AAED1Q7RTV5 226 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 GPAT4Q86UL3 456 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 LRRC34Q8IZ02 419 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 CNOT9Q92600 299 aaKnown RBP12.91□□□□□ -0.34
TARDBP-231ENST00000639599 OR52E6Q96RD3 313 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 BEX2Q9BXY8 128 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 ARMC7Q9H6L4 198 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 BTNL2Q9UIR0 455 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 OSGIN1Q9UJX0 560 aa12.91□□□□□ -0.34
TARDBP-231ENST00000639599 MAP1AP78559 2803 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 PCNX3Q9H6A9 2034 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 GOLGA8QA0A0J9YX86 632 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 GOLGA8OA6NCC3 632 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 CCDC154A6NI56 674 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 AGAP5A6NIR3 686 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 GOLGA8NF8WBI6 632 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 HMGN4O00479 90 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 BCAS1O75363 584 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 ANP32DO95626 131 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 ITGA5P08648 1049 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 GTF2E2P29084 291 aaKnown RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 MPGP29372 298 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 SLC1A3P43003 542 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 UBE2NP61088 152 aaKnown RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 SNRPD2P62316 118 aaKnown RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 FUT5Q11128 374 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 OR7A5Q15622 319 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 SYPL1Q16563 259 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 CARTPTQ16568 116 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms