RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 CEACAM4O75871 244 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 NEURL1O76050 574 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 TNFAIP8O95379 198 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 CH25HO95992 272 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 LYNP07948 512 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 FUT1P19526 365 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 CCNA2P20248 432 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 DPP4P27487 766 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 DNASE1L1P49184 302 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 SMSP52788 366 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 MYBPC1Q00872 1141 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 CD47Q08722 323 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 CDK5R2Q13319 367 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 ANKDD1AQ495B1 522 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 C6orf141Q5SZD1 244 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 TMEM236Q5W0B7 351 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 C12orf73Q69YU5 71 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 SPINK14Q6IE38 97 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 SLC27A4Q6P1M0 643 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 POMZP3Q6PJE2 187 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 SMARCD3Q6STE5 483 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 CASP12Q6UXS9 341 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 ZNF620Q6ZNG0 422 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 C10orf53Q8N6V4 93 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 OR6S1Q8NH40 331 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 RHOXF1Q8NHV9 184 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 FAM81AQ8TBF8 368 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 POC1BQ8TC44 478 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 TRUB1Q8WWH5 349 aaKnown RBP10.66□□□□□ -0.7
CLN6-223ENST00000637823 HDAC2Q92769 488 aaKnown RBP10.66□□□□□ -0.7
CLN6-223ENST00000637823 TAAR8Q969N4 342 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 JSRP1Q96MG2 331 aaPredicted RBP10.66□□□□□ -0.7
CLN6-223ENST00000637823 GNRHR2Q96P88 292 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 TNFRSF13CQ96RJ3 184 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 FAM173AQ9BQD7 235 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 TSSK6Q9BXA6 273 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 TEX12Q9BXU0 123 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 SERINC1Q9NRX5 453 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 TBC1D23Q9NUY8 699 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 IMPAD1Q9NX62 359 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 CHRNA9Q9UGM1 479 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 SIGLEC7Q9Y286 467 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 MYRFQ9Y2G1 1151 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 MRPS18CQ9Y3D5 142 aaKnown RBP10.66□□□□□ -0.7
CLN6-223ENST00000637823 KCNMB2Q9Y691 235 aa10.66□□□□□ -0.7
CLN6-223ENST00000637823 OR2T1O43869 369 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 ZIC3O60481 467 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 WISP1O95388 367 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 F10P00742 488 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 MT-ATP6P00846 226 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 BGLAPP02818 100 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 HIST1H2ABP04908 130 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 HMGN1P05114 100 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 SP1P08047 785 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 CD46P15529 392 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 BMP7P18075 431 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 HK1P19367 917 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 CLK1P49759 484 aaKnown RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 CSNK2BP67870 215 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 FOXF1Q12946 379 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 TOP3AQ13472 1001 aaPredicted RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 MAD2L1BPQ15013 274 aaPredicted RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 ZNF74Q16587 644 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.65□□□□□ -0.7
CLN6-223ENST00000637823 CTU2Q2VPK5 515 aaKnown RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 RBM48Q5RL73 367 aaKnown RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 C1orf140Q5VVS0 124 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 SLC25A25Q6KCM7 469 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 ACSM5Q6NUN0 579 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 IGFL2Q6UWQ7 119 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 PTCHD4Q6ZW05 846 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 HIST3H2AQ7L7L0 130 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 SLC46A3Q7Z3Q1 461 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 CCDC71Q8IV32 467 aaPredicted RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 ENTHD1Q8IYW4 607 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 ZNF786Q8N393 782 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 GTPBP8Q8N3Z3 284 aaPredicted RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 MDS2Q8NDY4 140 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 OR52L1Q8NGH7 329 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 OR8D4Q8NGM9 314 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 OR13C2Q8NGS9 318 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 OR51A7Q8NH64 312 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 FANK1Q8TC84 345 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 HIST1H2ACQ93077 130 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 UBE2FQ969M7 185 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 DDIT4LQ96D03 193 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 KTI12Q96EK9 354 aaPredicted RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 SAMD8Q96LT4 415 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 POTEKPQ9BYX7 375 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 PLA2G12AQ9BZM1 189 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 OR52D1Q9H346 318 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 FKRPQ9H9S5 495 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 ZFP64Q9NPA5 681 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 NANSQ9NR45 359 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 DEPPQ9NTK1 212 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 TUBA8Q9NY65 449 aaPredicted RBP10.65□□□□□ -0.7
CLN6-223ENST00000637823 ZNF226Q9NYT6 803 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 ZNF229Q9UJW7 825 aa10.65□□□□□ -0.7
CLN6-223ENST00000637823 DKKL1Q9UK85 242 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms