RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 NAA11Q9BSU3 229 aaPredicted RBP12.26□□□□□ -0.45
PNKP-228ENST00000637325 SPATA9Q9BWV2 254 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 UBTD1Q9HAC8 227 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 BCL2L10Q9HD36 194 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 SLC25A37Q9NYZ2 338 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 SLAMF8Q9P0V8 285 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 PRDM4Q9UKN5 801 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 CORO2BQ9UQ03 480 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 TRAPPC4Q9Y296 219 aa12.26□□□□□ -0.45
PNKP-228ENST00000637325 A0A0G2JND7 137 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 A0A1W2PP18 115 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 A0A1W2PPR1 153 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 GPR171O14626 319 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 EDF1O60869 148 aaKnown RBP12.25□□□□□ -0.45
PNKP-228ENST00000637325 THBDP07204 575 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 BMP2P12643 396 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 OR3A2P47893 321 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 P2RY6Q15077 328 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 PDK3Q15120 406 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 TSC22D1Q15714 1073 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 DEFB113Q30KQ7 82 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.25□□□□□ -0.45
PNKP-228ENST00000637325 GABRG1Q8N1C3 465 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 UBE2J2Q8N2K1 259 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 NFKBIDQ8NI38 313 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 STON2Q8WXE9 905 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 ALPK1Q96QP1 1244 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 SIKE1Q9BRV8 207 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 ADAM19Q9H013 955 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 CXXC4Q9H2H0 198 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 VAPAQ9P0L0 249 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 PRSS50Q9UI38 385 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 LEF1Q9UJU2 399 aaPredicted RBP12.25□□□□□ -0.45
PNKP-228ENST00000637325 ING1Q9UK53 422 aaPredicted RBP12.25□□□□□ -0.45
PNKP-228ENST00000637325 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
PNKP-228ENST00000637325 RAI1Q7Z5J4 1906 aaPredicted RBP12.25□□□□□ -0.45
PNKP-228ENST00000637325 ACANP16112 2415 aa12.25□□□□□ -0.45
PNKP-228ENST00000637325 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 ZNF814B7Z6K7 855 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 ANGPT2O15123 496 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 EIF1BO60739 113 aaKnown RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 GCM2O75603 506 aaPredicted RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 PGM3O95394 542 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 ARAFP10398 606 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 HOXB9P17482 250 aaPredicted RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 FPR1P21462 350 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 ACAA2P42765 397 aaKnown RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 NR1H2P55055 460 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 CDK6Q00534 326 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 ITGADQ13349 1161 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 CAPRIN1Q14444 709 aaKnown RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 USF3Q68DE3 2245 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 ABLIM2Q6H8Q1 611 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 REEP3Q6NUK4 255 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 Q6ZT83 130 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 SERPINA11Q86U17 422 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 KRT73Q86Y46 540 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 CCDC103Q8IW40 242 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 MSRB3Q8IXL7 192 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 HSD17B8Q92506 261 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 PLPPR2Q96GM1 343 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 USB1Q9BQ65 265 aaKnown RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 SPATA5L1Q9BVQ7 753 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 POTEKPQ9BYX7 375 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 NGBQ9NPG2 151 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 SLC52A3Q9NQ40 469 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 BEX4Q9NWD9 120 aaPredicted RBP12.24□□□□□ -0.45
PNKP-228ENST00000637325 RPS6KB2Q9UBS0 482 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 NDUFAF1Q9Y375 327 aa12.24□□□□□ -0.45
PNKP-228ENST00000637325 IGKV3D-15A0A087WSY6 115 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 ZC3H12DA2A288 527 aaKnown RBP12.23□□□□□ -0.45
PNKP-228ENST00000637325 KLF4O43474 513 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 MRPL33O75394 65 aaKnown RBP12.23□□□□□ -0.45
PNKP-228ENST00000637325 GPIP06744 558 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 IMPDH2P12268 514 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 ETS2P15036 469 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 CD53P19397 219 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 SLC6A2P23975 617 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 IDUAP35475 653 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 OR7A5Q15622 319 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 STK11Q15831 433 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 ACKR1Q16570 336 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 APH1AQ96BI3 265 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 TAPBPLQ9BX59 468 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 SLC13A4Q9UKG4 626 aa12.23□□□□□ -0.45
PNKP-228ENST00000637325 PLCE1Q9P212 2302 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 ZNF716A6NP11 495 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 A8MVM7 634 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 FRS3O43559 492 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 LYZL6O75951 148 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 CNOT4O95628 575 aaKnown RBP12.22□□□□□ -0.45
PNKP-228ENST00000637325 IGHV3-9P01782 118 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 TROVE2P10155 538 aaKnown RBP eCLIP12.22□□□□□ -0.45
PNKP-228ENST00000637325 PRG2P13727 222 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 CD99P14209 185 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 GPX2P18283 190 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 PRKAR1BP31321 381 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 SLC16A1P53985 500 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms