RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ZNF511Q8NB15 262 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 CEP76Q8TAP6 659 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 FAM174AQ8TBP5 190 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 HSPA12BQ96MM6 686 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 TTYH2Q9BSA4 534 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 HOXD1Q9GZZ0 328 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 Q9N2J8 555 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 DDX28Q9NUL7 540 aaKnown RBP17.31■□□□□ 0.36
CLN5-216ENST00000636780 NLKQ9UBE8 527 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 RASD1Q9Y272 281 aa17.31■□□□□ 0.36
CLN5-216ENST00000636780 CCDC85CA6NKD9 419 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 C10orf142B7Z368 130 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 CLPSP04118 112 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 PSKH1P11801 424 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 PEPDP12955 493 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 SLC2A5P22732 501 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 AQP2P41181 271 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 RPL6Q02878 288 aaKnown RBP17.3■□□□□ 0.36
CLN5-216ENST00000636780 ATAD3CQ5T2N8 411 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 C1QL3Q5VWW1 255 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 XKRXQ6PP77 449 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 RTL4Q6ZR62 310 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 GID4Q8IVV7 300 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 TMCO6Q96DC7 493 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 LMF2Q9BU23 707 aaKnown RBP17.3■□□□□ 0.36
CLN5-216ENST00000636780 PPP1R3EQ9H7J1 279 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 IRGMA1A4Y4 181 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 PRR32B1ATL7 298 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 EIF4EP06730 217 aaKnown RBP17.3■□□□□ 0.36
CLN5-216ENST00000636780 ZNF3P17036 446 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 ZP2Q05996 745 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 TOMM34Q15785 309 aaPredicted RBP17.3■□□□□ 0.36
CLN5-216ENST00000636780 ZNF615Q8N8J6 731 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 ABHD4Q8TB40 342 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 Q96M85 177 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 GPR27Q9NS67 375 aa17.3■□□□□ 0.36
CLN5-216ENST00000636780 COL4A2P08572 1712 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 A0A1B0GTH9 108 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 SERINC4A6NH21 518 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 B4DXG7 233 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 CLDN4O14493 209 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 HK1P19367 917 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 SRP9P49458 86 aaKnown RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 EVX1P49640 407 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 ATP12AP54707 1039 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 CD83Q01151 205 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 CFHR1Q03591 330 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 FGFBP1Q14512 234 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 MANEAQ5SRI9 462 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 ZCCHC12Q6PEW1 402 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 SAMD12Q8N8I0 201 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 OR5H6Q8NGV6 325 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 OR6F1Q8NGZ6 308 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 PTPMT1Q8WUK0 201 aaPredicted RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 DEPDC7Q96QD5 511 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 GFM1Q96RP9 751 aaKnown RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 TRPV5Q9NQA5 729 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 PLSCR3Q9NRY6 295 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 EXTL2Q9UBQ6 330 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 ING1Q9UK53 422 aaPredicted RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 MRPS7Q9Y2R9 242 aaKnown RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 IGHV3-20A0A0C4DH32 117 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 FAM221BA6H8Z2 402 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 C2orf72A6NCS6 295 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 RGS9O75916 674 aaPredicted RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 MST1P26927 711 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 GABRA4P48169 554 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 BLKP51451 505 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 IFITM2Q01629 132 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 TBRG1Q3YBR2 411 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 SYT13Q7L8C5 426 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 RAB43Q86YS6 212 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 IZUMO1Q8IYV9 350 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 HSD17B8Q92506 261 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 NDC1Q9BTX1 674 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 NEK6Q9HC98 313 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 RANGRFQ9HD47 186 aaPredicted RBP17.29■□□□□ 0.36
CLN5-216ENST00000636780 ACOXLQ9NUZ1 547 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 PCDHGB2Q9Y5G2 931 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 N6AMT1Q9Y5N5 214 aa17.29■□□□□ 0.36
CLN5-216ENST00000636780 MED12Q93074 2177 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 TMEM150CB9EJG8 249 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 RACK1P63244 317 aaKnown RBP17.28■□□□□ 0.36
CLN5-216ENST00000636780 ODF4Q2M2E3 257 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 ULK3Q6PHR2 472 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 VASH1Q7L8A9 365 aaPredicted RBP17.28■□□□□ 0.36
CLN5-216ENST00000636780 TDHQ8IZJ6 230 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 C3orf49Q96BT1 292 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 MED18Q9BUE0 208 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 ZNF426Q9BUY5 554 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 TP63Q9H3D4 680 aaPredicted RBP17.28■□□□□ 0.36
CLN5-216ENST00000636780 GNG8Q9UK08 70 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 IGKV1D-42A0A075B6H8 117 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 NPIPB9F8W1W9 429 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 DCTN6O00399 190 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 BCKDHBP21953 392 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 ACSM3Q53FZ2 586 aa17.28■□□□□ 0.36
CLN5-216ENST00000636780 OR5M10Q6IEU7 315 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms