RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ENPP1P22413 925 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 STOMP27105 288 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 PBX2P40425 430 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 P2RX3P56373 397 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 KCNAB1Q14722 419 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 TMEM255AQ5JRV8 349 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 STPG1Q5TH74 334 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 PRAMEF8Q5VWM4 474 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 PRAMEF7Q5VXH5 474 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 KANSL1Q7Z3B3 1105 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 GIMAP1Q8WWP7 306 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 ZC3HAV1LQ96H79 300 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 CCDC120Q96HB5 630 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 MYADMQ96S97 322 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 SEMA4CQ9C0C4 833 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 OR51J1Q9H342 316 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 ANKRD19PQ9H560 264 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 C19orf53Q9UNZ5 99 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 K7EQS6 105 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 GMDSO60547 372 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 GATBO75879 557 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 HOXB2P14652 356 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 NPR2P20594 1047 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 UXS1Q8NBZ7 420 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 YIPF5Q969M3 257 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 SERINC2Q96SA4 455 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 GAS2L1Q99501 681 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 DPAGT1Q9H3H5 408 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 TRPV4Q9HBA0 871 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 MCCC2Q9HCC0 563 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 KLK11Q9UBX7 282 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 PHF11Q9UIL8 331 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 ING1Q9UK53 422 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 C17orf51A8MQB3 221 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 KLF8O95600 359 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 OC90Q02509 493 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 SNTB2Q13425 540 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 ST3GAL2Q16842 350 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 PLCZ1Q86YW0 608 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 C7orf61Q8IZ16 206 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF527Q8NB42 609 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 WDR89Q96FK6 387 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 HSPA12BQ96MM6 686 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 C1QTNF6Q9BXI9 259 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 FAM60AQ9NP50 221 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 NOX4Q9NPH5 578 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 RCE1Q9Y256 329 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 A0A0A6YYC8 382 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 I3L1I5 382 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 FLRT2O43155 660 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 PLPP2O43688 288 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 ICMTO60725 284 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 LYPD3O95274 346 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 GPANK1O95872 356 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 HK1P19367 917 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 CEBPEQ15744 281 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 KIRREL2Q6UWL6 708 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 UBE2Q1Q7Z7E8 422 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 SLCO1C1Q9NYB5 712 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 LRIT1Q9P2V4 623 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 ING4Q9UNL4 249 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 PPIEQ9UNP9 301 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF267Q14586 743 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 BICRALQ6AI39 1079 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 USP53Q70EK8 1073 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 ACOT12Q8WYK0 555 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 AHCYL2Q96HN2 611 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 MAP6Q96JE9 813 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 ZFYVE21Q9BQ24 234 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 NIPAL2Q9H841 368 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 DOCK8Q8NF50 2099 aa12.91□□□□□ -0.34
CACNA1A-228ENST00000636610 RTTNQ86VV8 2226 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 ASXL3Q9C0F0 2248 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 GPR75O95800 540 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 EPXP11678 715 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 RBMS1P29558 406 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 BTG2P78543 158 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 ACSM1Q08AH1 577 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 TNK1Q13470 666 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 RTL4Q6ZR62 310 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 FCRLAQ7L513 359 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 CMTM4Q8IZR5 234 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 CDRT4Q8N9R6 151 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 OR4C3Q8NH37 302 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 OR51Q1Q8NH59 317 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 CEP76Q8TAP6 659 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 BMFQ96LC9 184 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 HYLS1Q96M11 299 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 GTPBP2Q9BX10 602 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 SRA1Q9HD15 236 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 ZFP64Q9NPA5 681 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 RPS6KB2Q9UBS0 482 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 TRABD2BA6NFA1 517 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms