RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 PAQR6Q6TCH4 344 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 SLC7A5P1Q8MH63 180 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 RCBTB1Q8NDN9 531 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 FAM83FQ8NEG4 500 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 KIR3DX1Q9H7L2 352 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 ZNF160Q9HCG1 818 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 MAN2C1Q9NTJ4 1040 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 KCNIP3Q9Y2W7 256 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 PCM1Q15154 2024 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 HTR2BP41595 481 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 OTPQ5XKR4 325 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 TMEM179BQ7Z7N9 219 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 ZNF582Q96NG8 517 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 FOLH1BQ9HBA9 442 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 PRDM9Q9NQV7 894 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 REV1Q9UBZ9 1251 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 SRPK3Q9UPE1 567 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 ZC3H12DA2A288 527 aaKnown RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 MEIOCA2RUB1 952 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 DCNP07585 359 aaKnown RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 CRABP1P29762 137 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 EPHA5P54756 1037 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 RAB38P57729 211 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 OR1D5P58170 312 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
GABRB3-219ENST00000636466 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 FBXL6Q8N531 539 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 SYNPRQ8TBG9 265 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 FOXQ1Q9C009 403 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 TAS2R3Q9NYW6 316 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 COPZ2Q9P299 210 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 ZNF337Q9Y3M9 751 aa13.19□□□□□ -0.3
GABRB3-219ENST00000636466 RP2O75695 350 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 RAB3DO95716 219 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 NPR2P20594 1047 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 PKLRP30613 574 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SLC6A8P48029 635 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 KDM4DQ6B0I6 523 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 TMEM53Q6P2H8 277 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SPRED2Q7Z698 418 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 RBM12BQ8IXT5 1001 aaKnown RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 MFSD8Q8NHS3 518 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 TCTN2Q96GX1 697 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 OR6C1Q96RD1 312 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 LMF2Q9BU23 707 aaKnown RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 ST6GALNAC5Q9BVH7 336 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 UBQLN3Q9H347 655 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 A0A087WUU8 490 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SLC16A6O15403 523 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 ST6GAL1P15907 406 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 PVALBP20472 110 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 RSU1Q15404 277 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 LCN10Q6JVE6 187 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 KIAA1211LQ6NV74 962 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 PRR18Q8N4B5 295 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 PCDHGA6Q9Y5G7 932 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 AP1M2Q9Y6Q5 423 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 V9GY05 133 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SLC33A1O00400 549 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 APOC3P02656 99 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 CD79AP11912 226 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 MELKQ14680 651 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 TECPR1Q7Z6L1 1165 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 HLA-CQ95604 372 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 CPNE2Q96FN4 548 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 Q96M85 177 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 ALG12Q9BV10 488 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 ACER3Q9NUN7 267 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 FKBP14Q9NWM8 211 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SERINC4A6NH21 518 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 WDPCPO95876 746 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 APOC1P02654 83 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SYPP08247 313 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 FASLGP48023 281 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SLC14A1Q13336 389 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 CAMK2DQ13557 499 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 GPR50Q13585 617 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 MFSD13AQ14CX5 517 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 ZNF595Q8IYB9 648 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 ZSCAN4Q8NAM6 433 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 ZMAT3Q9HA38 289 aaKnown RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
GABRB3-219ENST00000636466 TESQ9UGI8 421 aaKnown RBP13.18□□□□□ -0.3
GABRB3-219ENST00000636466 MAGEB4O15481 346 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-219ENST00000636466 OR7A10O76100 309 aa13.17□□□□□ -0.3
GABRB3-219ENST00000636466 ZNF28P17035 718 aa13.17□□□□□ -0.3
GABRB3-219ENST00000636466 LIM2P55344 173 aa13.17□□□□□ -0.3
GABRB3-219ENST00000636466 CSNK2A1P68400 391 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-219ENST00000636466 TMEM196Q5HYL7 178 aa13.17□□□□□ -0.3
GABRB3-219ENST00000636466 ELMOD2Q8IZ81 293 aa13.17□□□□□ -0.3
GABRB3-219ENST00000636466 SPAG16Q8N0X2 631 aa13.17□□□□□ -0.3
GABRB3-219ENST00000636466 CSNK2A3Q8NEV1 391 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms