RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 HTR1EP28566 365 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CYP1B1Q16678 543 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SFRP4Q6FHJ7 346 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CD300LGQ6UXG3 332 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CMTM4Q8IZR5 234 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 NT5C3BQ969T7 300 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RTP4Q96DX8 246 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 DPH1Q9BZG8 443 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 NT5DC2Q9H857 520 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CBLCQ9ULV8 474 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 IER3IP1Q9Y5U9 82 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 FMN2Q9NZ56 1722 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF840PA6NDX5 716 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 KDM4EB2RXH2 506 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 H3BSA7 217 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 GAPDHSO14556 408 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RDH16O75452 317 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RETP07949 1114 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CTSAP10619 480 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 GABREP78334 506 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 MRPS10P82664 201 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TATDN3Q17R31 274 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 C6orf136Q5SQH8 315 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 BAGE2Q86Y30 109 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 OR52B6Q8NGF0 335 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 OR52R1Q8NGF1 315 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ADAMTS19Q8TE59 1207 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TRUB1Q8WWH5 349 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SLC35E1Q96K37 410 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 MGLLQ99685 303 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 WDR83Q9BRX9 315 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 OR52A5Q9H2C5 316 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RNF39Q9H2S5 420 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ACKR4Q9NPB9 350 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 IL26Q9NPH9 171 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 STARD5Q9NSY2 213 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SMOXQ9NWM0 555 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ENPP5Q9UJA9 477 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 HSPE1-MOB4S4R3N1 261 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ROBO1Q9Y6N7 1651 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SUSD5O60279 629 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 MT-ND4P03905 459 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 DPP4P27487 766 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ELK4P28324 431 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 HOXA11P31270 313 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ECI1P42126 302 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 MAGEB1P43366 347 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CLDN6P56747 220 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CLDN17P56750 224 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 C17orf67Q0P5P2 114 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RAB33AQ14088 237 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 OR8G1Q15617 311 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SLC6A19Q695T7 634 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 KAZALD1Q96I82 304 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CPPED1Q9BRF8 314 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 PADI1Q9ULC6 663 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TEX264Q9Y6I9 313 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 BCL9LQ86UU0 1499 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF814B7Z6K7 855 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 STC2O76061 302 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SORBS2O94875 1100 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 F2P00734 622 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SNHG28P0DPA3 235 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 FCER1GP30273 86 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 EIF1P41567 113 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 PTGIRP43119 386 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TGM4P49221 684 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CYB561P49447 251 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TAS2R19P59542 299 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 UBE2G1P62253 170 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 GPR18Q14330 331 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF595Q8IYB9 648 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 C1orf87Q8N0U7 546 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 OR1S2Q8NGQ3 325 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM239Q8WW34 195 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM19Q96HH6 336 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 MED18Q9BUE0 208 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 KATNB1Q9BVA0 655 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 MCOLN1Q9GZU1 580 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 USP36Q9P275 1121 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 NOCTQ9UK39 431 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 FBXO4Q9UKT5 387 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 WDR37Q9Y2I8 494 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 K7EPK0 472 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 DEGS1O15121 323 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 PRAF2O60831 178 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 FCGR2AP12318 317 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 IL4RP24394 825 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TRIM23P36406 574 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SLC18A1P54219 525 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 CLDN8P56748 225 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 HOXA4Q00056 320 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 HMGN3Q15651 99 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 PHYHD1Q5SRE7 291 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 DCAF12L1Q5VU92 463 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TIFABQ6ZNK6 161 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 KANSL1Q7Z3B3 1105 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 LSMEM2Q8N112 164 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms