RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PNPLA2Q96AD5 504 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 C1GALT1C1Q96EU7 318 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 C7orf34Q96L11 122 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF559Q9BR84 538 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 SLC25A18Q9H1K4 315 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 TMEM27Q9HBJ8 222 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 CCNB1IP1Q9NPC3 277 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 RPS6KB2Q9UBS0 482 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 TESQ9UGI8 421 aaKnown RBP13.11□□□□□ -0.31
LINC00339-208ENST00000634934 ENPP5Q9UJA9 477 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 FAM32AQ9Y421 112 aaKnown RBP13.11□□□□□ -0.31
LINC00339-208ENST00000634934 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 A0A1W2PPW3 197 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
LINC00339-208ENST00000634934 ACOT7O00154 380 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 TPST2O60704 377 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 CLPXO76031 633 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 CLIC3O95833 236 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 BCL10O95999 233 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 HK1P19367 917 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 PCMT1P22061 227 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 HTR2AP28223 471 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
LINC00339-208ENST00000634934 PPIAP62937 165 aaKnown RBP13.1□□□□□ -0.31
LINC00339-208ENST00000634934 TEKQ02763 1124 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 FOXD4Q12950 439 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-208ENST00000634934 OTUD3Q5T2D3 398 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-208ENST00000634934 PLEKHM3Q6ZWE6 761 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 SLC22A16Q86VW1 577 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 CYP4Z1Q86W10 505 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 RNF217Q8TC41 542 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 TRIM2Q9C040 744 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 IL1RAPQ9NPH3 570 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 MED17Q9NVC6 651 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 TAS2R10Q9NYW0 307 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-208ENST00000634934 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
LINC00339-208ENST00000634934 J3KTA2 159 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 SLC1A7O00341 560 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 SLC22A1O15245 554 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 FMO6PO60774 539 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 GLSO94925 669 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-208ENST00000634934 DIRAS1O95057 198 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 GP1BBP13224 206 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 ITGA2P17301 1181 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 MAGEA5P43359 124 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 DSCR4P56555 118 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-208ENST00000634934 TAS2R41P59536 307 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 CD47Q08722 323 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 OR1Q1Q15612 314 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 FGD3Q5JSP0 725 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 ENTPD8Q5MY95 495 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 WBP2NLQ6ICG8 309 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 TMEM251Q8N6I4 163 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 LSM14AQ8ND56 463 aaKnown RBP13.09□□□□□ -0.31
LINC00339-208ENST00000634934 TMEM234Q8WY98 164 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF524Q96C55 264 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 PLEKHA8Q96JA3 519 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 COX4I2Q96KJ9 171 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF300Q96RE9 604 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-208ENST00000634934 PITX2Q99697 317 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF703Q9H7S9 590 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-208ENST00000634934 NDUFAF4Q9P032 175 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 RHCGQ9UBD6 479 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-208ENST00000634934 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
LINC00339-208ENST00000634934 A0A087WZY1 265 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 SHISA8B8ZZ34 492 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 FAAHO00519 579 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 TFECO14948 347 aaPredicted RBP13.08□□□□□ -0.31
LINC00339-208ENST00000634934 GABARAPO95166 117 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 HTR1AP08908 422 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF24P17028 368 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 ELK4P28324 431 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 SRD5A2P31213 254 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 PIN1Q13526 163 aaPredicted RBP13.08□□□□□ -0.31
LINC00339-208ENST00000634934 GANABQ14697 944 aaKnown RBP13.08□□□□□ -0.31
LINC00339-208ENST00000634934 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 LAIR2Q6ISS4 152 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 TSEN54Q7Z6J9 526 aaKnown RBP13.08□□□□□ -0.31
LINC00339-208ENST00000634934 YRDCQ86U90 279 aaKnown RBP13.08□□□□□ -0.31
LINC00339-208ENST00000634934 TSPYL5Q86VY4 417 aaPredicted RBP13.08□□□□□ -0.31
LINC00339-208ENST00000634934 OR14L1PQ8NHC6 308 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 ITPKCQ96DU7 683 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF347Q96SE7 839 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 UBQLN3Q9H347 655 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 ACER3Q9NUN7 267 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 SELENONQ9NZV5 590 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 TPRKBQ9Y3C4 175 aa13.08□□□□□ -0.31
LINC00339-208ENST00000634934 A0A1B0GWA3 101 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 GNGT2O14610 69 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 ZIC3O60481 467 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 SEMA7AO75326 666 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 CELA3AP09093 270 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 PRKCAP17252 672 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 RHCEP18577 417 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms