RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 LRRN3Q9H3W5 708 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 DCLRE1BQ9H816 532 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 UBE2TQ9NPD8 197 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 NGBQ9NPG2 151 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 MAN2C1Q9NTJ4 1040 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 DDX28Q9NUL7 540 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SOHLH2Q9NX45 425 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PLEK2Q9NYT0 353 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CNOT2Q9NZN8 540 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM9Q9P0T7 183 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PISDQ9UG56 409 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR12D3Q9UGF7 316 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 RWDD2AQ9UIY3 292 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SH3BGRL2Q9UJC5 107 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 STAP1Q9ULZ2 295 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 AURKCQ9UQB9 309 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC17A4Q9Y2C5 497 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PPIL1Q9Y3C6 166 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR1A2Q9Y585 309 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PCYT1BQ9Y5K3 369 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ETV7Q9Y603 341 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SELENOKQ9Y6D0 94 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SMAD5-AS1Q9Y6J3 95 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 FBN1P35555 2871 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ANKHD1Q8IWZ3 2542 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CROCCQ5TZA2 2017 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CPAMD8Q8IZJ3 1885 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SNRNP200O75643 2136 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SYNJ2BP-COX16A0A087WUM0 186 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 A0A0U1RRA0 63 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 F8WDY8 70 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SLCO1B7G3V0H7 640 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 K7EM74 188 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PSMD11O00231 422 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC1A7O00341 560 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ARPC1BO15143 372 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 B4GAT1O43505 415 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 DUX1O43812 170 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PCDH7O60245 1069 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 CEACAM4O75871 244 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TM7SF2O76062 418 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SMC2O95347 1197 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 POP4O95707 220 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TXNDC12O95881 172 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 IGSF6O95976 241 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 FGF1P05230 155 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 IVLP07476 585 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PRSS1P07477 247 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PLEKP08567 350 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SFTPCP11686 197 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 CCNB1P14635 433 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 UCHL3P15374 230 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 F8A1P23610 371 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ACAA2P42765 397 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ALDH3B1P43353 468 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 UQCRFS1P47985 274 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 HSD17B7P56937 341 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 STX17P56962 302 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC26A5P58743 744 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SNRPD1P62314 119 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 HERV-K104P63124 156 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 UBE2IP63279 158 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 CSNK2BP67870 215 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 KLHL30Q0D2K2 578 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ELP6Q0PNE2 266 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 HSPA14Q0VDF9 509 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 HEPACAMQ14CZ8 416 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 EFTUD2Q15029 972 aaKnown RBP eCLIP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 RBBP5Q15291 538 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ELOCQ15369 112 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 CYTH1Q15438 398 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 OR1C1Q15619 314 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TRADDQ15628 312 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TAB1Q15750 504 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 GTDC1Q4AE62 458 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM106AQ4KMX7 169 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TEX35Q5T0J7 233 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ATP1A1-AS1Q5TC04 95 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 LYPLAL1Q5VWZ2 237 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 HIST2H2AA3Q6FI13 130 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 IRGCQ6NXR0 463 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 WDR74Q6RFH5 385 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM159AQ6UWV7 190 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM64Q6YI46 380 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SH2D5Q6ZV89 423 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TIPARPQ7Z3E1 657 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 C17orf64Q86WR6 236 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF677Q86XU0 584 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PHF13Q86YI8 300 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 APLFQ8IW19 511 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 HSCBQ8IWL3 235 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 KLHDC8BQ8IXV7 354 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC22A15Q8IZD6 547 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PYROXD2Q8N2H3 581 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 RNF148Q8N7C7 305 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM35BQ8NCS4 154 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 OR5AP2Q8NGF4 316 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 OR5T2Q8NGG2 359 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 OR56B1Q8NGI3 324 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 OR4D10Q8NGI6 311 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms