RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 WBP2NLQ6ICG8 309 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 TFAP2EQ6VUC0 442 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 STK32CQ86UX6 486 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 DDIT4LQ96D03 193 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 ZC3HAV1LQ96H79 300 aaKnown RBP12.63□□□□□ -0.39
PNKP-223ENST00000629179 ANKRD27Q96NW4 1050 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 HEATR1Q9H583 2144 aaKnown RBP12.63□□□□□ -0.39
PNKP-223ENST00000629179 CCDC134Q9H6E4 229 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 TMEM38AQ9H6F2 299 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 BCO1Q9HAY6 547 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 GP6Q9HCN6 339 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 KLHL9Q9P2J3 617 aa12.63□□□□□ -0.39
PNKP-223ENST00000629179 ZNF814B7Z6K7 855 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 SIAH2O43255 324 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 TPST1O60507 370 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 RAMP1O60894 148 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 HRGP04196 525 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 IMPDH2P12268 514 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 SLC6A2P23975 617 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 CXCR1P25024 350 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 EDNRAP25101 427 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 DNAJA1P31689 397 aaKnown RBP12.62□□□□□ -0.39
PNKP-223ENST00000629179 MDH1P40925 334 aaKnown RBP12.62□□□□□ -0.39
PNKP-223ENST00000629179 KLF10Q13118 480 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 CAPRIN1Q14444 709 aaKnown RBP12.62□□□□□ -0.39
PNKP-223ENST00000629179 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.62□□□□□ -0.39
PNKP-223ENST00000629179 COMTD1Q86VU5 262 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 PTOV1Q86YD1 416 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 CCDC103Q8IW40 242 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 ZHX1-C8orf76Q96EF9 292 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 SAR1AQ9NR31 198 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 C6orf203Q9P0P8 240 aaPredicted RBP12.62□□□□□ -0.39
PNKP-223ENST00000629179 TMEM181Q9P2C4 612 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 TRAPPC4Q9Y296 219 aa12.62□□□□□ -0.39
PNKP-223ENST00000629179 MAP1AP78559 2803 aaPredicted RBP12.61□□□□□ -0.39
PNKP-223ENST00000629179 A0A1W2PPR1 153 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 ZNF724A8MTY0 619 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 GCM2O75603 506 aaPredicted RBP12.61□□□□□ -0.39
PNKP-223ENST00000629179 FPR1P21462 350 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 AQP1P29972 269 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 TSC22D1Q15714 1073 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 GLIPR1L2Q4G1C9 344 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 ABLIM2Q6H8Q1 611 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 DHRS4L2Q6PKH6 230 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 CXorf67Q86X51 503 aaPredicted RBP12.61□□□□□ -0.39
PNKP-223ENST00000629179 KRT73Q86Y46 540 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 C3orf49Q96BT1 292 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 ZNF317Q96PQ6 595 aaPredicted RBP12.61□□□□□ -0.39
PNKP-223ENST00000629179 TACO1Q9BSH4 297 aaKnown RBP12.61□□□□□ -0.39
PNKP-223ENST00000629179 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 FANCFQ9NPI8 374 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 ZNF226Q9NYT6 803 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 PRSS50Q9UI38 385 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 PRDM4Q9UKN5 801 aa12.61□□□□□ -0.39
PNKP-223ENST00000629179 ITPR3Q14573 2671 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 ZNF716A6NP11 495 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 DEFB108AA8MXU0 73 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 DNPH1O43598 174 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 GOSR1O95249 250 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 ADAP00813 363 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 THBDP07204 575 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 CRYGSP22914 178 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 PRKAR1BP31321 381 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 OR3A2P47893 321 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 MAP2K6P52564 334 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 IST1P53990 364 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 SLC35A1P78382 337 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 CEACAM7Q14002 265 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 CYP51A1Q16850 503 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 GALNT5Q7Z7M9 940 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 GABRG1Q8N1C3 465 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 C11orf65Q8NCR3 313 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 HIPK4Q8NE63 616 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 OR10A6Q8NH74 314 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 PIGXQ8TBF5 258 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 PIK3IP1Q96FE7 263 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 ZNF607Q96SK3 696 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 SPATA5L1Q9BVQ7 753 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 PRR14Q9BWN1 585 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 ACTR6Q9GZN1 396 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 PLEKHF2Q9H8W4 249 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 KLHL14Q9P2G3 628 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 ST6GALNAC2Q9UJ37 374 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 ANGPT4Q9Y264 503 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 PLEKHA6Q9Y2H5 1048 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 GPR52Q9Y2T5 361 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 HIVEP1P15822 2718 aa12.6□□□□□ -0.39
PNKP-223ENST00000629179 IGKV3D-15A0A087WSY6 115 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 LOC100653049A0A140TA62 436 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 LIPT2A6NK58 231 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 A8MVM7 634 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 SERPINB7O75635 380 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 KRT34O76011 436 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
PNKP-223ENST00000629179 HTR2AP28223 471 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 NTF4P34130 210 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 IDUAP35475 653 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 H3F3AP84243 136 aa12.59□□□□□ -0.39
PNKP-223ENST00000629179 DMTNQ08495 405 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms