RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TMEM181Q9P2C4 612 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 MALT1Q9UDY8 824 aa16.65■□□□□ 0.26
SMN2-215ENST00000628696 CLDN24A6NM45 220 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 BPGMP07738 259 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 BMP4P12644 408 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 CREB1P16220 341 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 FKBP2P26885 142 aaKnown RBP16.64■□□□□ 0.25
SMN2-215ENST00000628696 CHI3L1P36222 383 aaPredicted RBP16.64■□□□□ 0.25
SMN2-215ENST00000628696 KCNJ10P78508 379 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 HPCAP84074 193 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 VLDLRP98155 873 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 CHRNB3Q05901 458 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 IFFO1Q0D2I5 559 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 ZNF544Q6NX49 715 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 FRRS1Q6ZNA5 592 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 WDR31Q8NA23 367 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 VPS37AQ8NEZ2 397 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 OR8J2Q8NGG1 315 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 NAA11Q9BSU3 229 aaPredicted RBP16.64■□□□□ 0.25
SMN2-215ENST00000628696 AKTIPQ9H8T0 292 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 PARPBPQ9NWS1 579 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 ASIC5Q9NY37 505 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 TRAPPC4Q9Y296 219 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 PMF1-BGLAPU3KQ54 211 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 MALRD1Q5VYJ5 2156 aa16.64■□□□□ 0.25
SMN2-215ENST00000628696 ARFGEF3Q5TH69 2177 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 TMED7-TICAM2A0A0A6YYA0 188 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 PRSS51A0A1B0GVH4 220 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 H7C417 338 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 LY6HO94772 140 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 KHKP50053 298 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 SLC35A1P78382 337 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 FUT5Q11128 374 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 ANXA8L1Q5VT79 327 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 NUDCD3Q8IVD9 361 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 C10orf105Q8TEF2 133 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 OIT3Q8WWZ8 545 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 CNOT9Q92600 299 aaKnown RBP16.63■□□□□ 0.25
SMN2-215ENST00000628696 SAP130Q9H0E3 1048 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 SLC17A5Q9NRA2 495 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 SLC7A10Q9NS82 523 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 MARCOQ9UEW3 520 aaPredicted RBP16.63■□□□□ 0.25
SMN2-215ENST00000628696 SLC9A8Q9Y2E8 581 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 TMED7Q9Y3B3 224 aa16.63■□□□□ 0.25
SMN2-215ENST00000628696 TMEM72A0PK05 275 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 WDR91A4D1P6 747 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 AP3D1O14617 1153 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 ITM2AO43736 263 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 SCN2BO60939 215 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 GUSBP08236 651 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 NUDT17P0C025 328 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 ZNF16P17020 682 aaPredicted RBP16.62■□□□□ 0.25
SMN2-215ENST00000628696 APOBEC3AP31941 199 aaPredicted RBP16.62■□□□□ 0.25
SMN2-215ENST00000628696 HTR3AP46098 478 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 EFNA4P52798 201 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 PHC1P78364 1004 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 TGFBR3Q03167 851 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 SMU1Q2TAY7 513 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 TSPO2Q5TGU0 170 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 SAXO2Q658L1 398 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 DDIT4LQ96D03 193 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 SHARPINQ9H0F6 387 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 EXOSC3Q9NQT5 275 aaKnown RBP16.62■□□□□ 0.25
SMN2-215ENST00000628696 LGALS13Q9UHV8 139 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 AMDHD2Q9Y303 409 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 FLVCR1Q9Y5Y0 555 aa16.62■□□□□ 0.25
SMN2-215ENST00000628696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMN2-215ENST00000628696 PRAMEF27A3QJZ7 478 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 PDLIM1O00151 329 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 EIF1BO60739 113 aaKnown RBP16.61■□□□□ 0.25
SMN2-215ENST00000628696 CSF3P09919 207 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 IMPDH2P12268 514 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 CDH2P19022 906 aaPredicted RBP16.61■□□□□ 0.25
SMN2-215ENST00000628696 USF1P22415 310 aaPredicted RBP16.61■□□□□ 0.25
SMN2-215ENST00000628696 TACR3P29371 465 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 POLR2HP52434 150 aaKnown RBP16.61■□□□□ 0.25
SMN2-215ENST00000628696 H3F3AP84243 136 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 SLC25A3Q00325 362 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 KLHL24Q6TFL4 600 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 ZNF781Q8N8C0 355 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMN2-215ENST00000628696 PROX1Q92786 737 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 PMM1Q92871 262 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 FBXO17Q96EF6 278 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 NEURL3Q96EH8 262 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 ZIM3Q96PE6 472 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 SLC35A5Q9BS91 424 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 LPAR3Q9UBY5 353 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 DCTN4Q9UJW0 460 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 OSGIN1Q9UJX0 560 aa16.61■□□□□ 0.25
SMN2-215ENST00000628696 ATP6V1G2-DDX39BF2Z307 99 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 LMX1BO60663 402 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 C1QCP02747 245 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 IGHV4-31P0DP07 118 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 PRPS1P60891 318 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 LSM11P83369 360 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMN2-215ENST00000628696 PLAURQ03405 335 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 SPANXN4Q5MJ08 99 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 RNF130Q86XS8 419 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms