RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 TOMM34Q15785 309 aaPredicted RBP6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 OCLNQ16625 522 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 TMEM44Q2T9K0 475 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 PGGHGQ32M88 737 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 ANKDD1AQ495B1 522 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SLC25A53Q5H9E4 307 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 TMEM201Q5SNT2 666 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SLC25A30Q5SVS4 291 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 MEDAGQ5VYS4 303 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 BICRALQ6AI39 1079 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 OR5M10Q6IEU7 315 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 LAIR2Q6ISS4 152 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF773Q6PK81 442 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 ISLR2Q6UXK2 745 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 MEX3DQ86XN8 651 aaKnown RBP6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 PLCZ1Q86YW0 608 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 BEST3Q8N1M1 668 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 FAM26EQ8N5C1 309 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 IQCF1Q8N6M8 205 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SIRT6Q8N6T7 355 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 C10orf53Q8N6V4 93 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 FADS6Q8N9I5 356 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 OR2M3Q8NG83 312 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 OR8D4Q8NGM9 314 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 OR13C2Q8NGS9 318 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 OR6S1Q8NH40 331 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 STK35Q8TDR2 534 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 APH1BQ8WW43 257 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 LIPHQ8WWY8 451 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 PSMF1Q92530 271 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 NTNG2Q96CW9 530 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 TMEM41AQ96HV5 264 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 PLEKHA8Q96JA3 519 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 MRGPRX4Q96LA9 322 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SAMD8Q96LT4 415 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 POLDIP3Q9BY77 421 aaKnown RBP6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 PLA2G12AQ9BZM1 189 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 OR52D1Q9H346 318 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 UBQLN3Q9H347 655 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 VCX3AQ9NNX9 186 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SERINC1Q9NRX5 453 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SACM1LQ9NTJ5 587 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF226Q9NYT6 803 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 TVP23BQ9NYZ1 205 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 STMN3Q9NZ72 180 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 MED11Q9P086 117 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF229Q9UJW7 825 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 TMED7Q9Y3B3 224 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SNX5Q9Y5X3 404 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 SPIN1Q9Y657 262 aaPredicted RBP6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF292O60281 2723 aa6.85□□□□□ -1.31
PTP4A1-206ENST00000627002 DMXL1Q9Y485 3027 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 TMEM72A0PK05 275 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 EFCAB10A6NFE3 127 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 SNTNA6NMZ2 147 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 C17orf51A8MQB3 221 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 C1QTNF9BB2RNN3 333 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 MASP2O00187 686 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF208O43345 1280 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 WBP4O75554 376 aaKnown RBP6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 NDUFB2O95178 105 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 CH25HO95992 272 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 MT-ATP6P00846 226 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 HIST1H2ABP04908 130 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 C1QTNF9P0C862 333 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 CCL3P10147 92 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ATP6V1B1P15313 513 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 FUT1P19526 365 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ADH6P28332 368 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 EIF1P41567 113 aaKnown RBP6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 MASP1P48740 699 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 NR1H2P55055 460 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 SOX8P57073 446 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 EFNB1P98172 346 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 FOXC1Q12948 553 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 MFSD13AQ14CX5 517 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 TGIF1Q15583 401 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 SNAPC1Q16533 368 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF74Q16587 644 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 PLPPR5Q32ZL2 321 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 TBC1D25Q3MII6 688 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 CRTC2Q53ET0 693 aaPredicted RBP6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 CLEC12AQ5QGZ9 265 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 PRAMEF20Q5VT98 475 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 B3GNTL1Q67FW5 361 aaPredicted RBP6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ACSM5Q6NUN0 579 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 DPY19L2P2Q6ZN68 376 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 HIST3H2AQ7L7L0 130 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 SLC46A3Q7Z3Q1 461 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ADGRG3Q86Y34 549 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 CCDC103Q8IW40 242 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 LNX2Q8N448 690 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 TCEANCQ8N8B7 351 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 ZNF540Q8NDQ6 660 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 OR1J4Q8NGS1 313 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 TMEM163Q8TC26 289 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 HIST1H2ACQ93077 130 aa6.84□□□□□ -1.31
PTP4A1-206ENST00000627002 MYDGFQ969H8 173 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms