RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DMRTC2Q8IXT2 367 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 POU5F2Q8N7G0 328 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 OR52E4Q8NGH9 312 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 PIGXQ8TBF5 258 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 STK35Q8TDR2 534 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 LZICQ8WZA0 190 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 PROX1Q92786 737 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 C14orf79Q96F83 325 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 NAA11Q9BSU3 229 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 RBM24Q9BX46 236 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 TAPBPLQ9BX59 468 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 POLR2J2Q9GZM3 115 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 POLR2J3Q9H1A7 115 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 SPAG4Q9NPE6 437 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 KLHL13Q9P2N7 655 aa12.53□□□□□ -0.4
SNRPA1-216ENST00000626000 ELOVL7A1L3X0 281 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 ELOA3DA6NLF2 546 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 ZNF724A8MTY0 619 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 A8MXE2 369 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 KDM4EB2RXH2 506 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 OR2T1O43869 369 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 CYTIPO60759 359 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 SHOX2O60902 331 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 SMNDC1O75940 238 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 AHSA1O95433 338 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 LGI1O95970 557 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 SHC1P29353 583 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 IDUAP35475 653 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 KIR2DL2P43627 348 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 KCNJ5P48544 419 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 SELPLGQ14242 412 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 MFSD13AQ14CX5 517 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 ELOA3BQ3SY89 546 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 SPATS1Q496A3 300 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 ZNF613Q6PF04 617 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 ELOA3Q8NG57 546 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 STARD4Q96DR4 205 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 SLC47A1Q96FL8 570 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 ZNF583Q96ND8 569 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 CCT8L2Q96SF2 557 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 EPYCQ99645 322 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 USB1Q9BQ65 265 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 PIF1Q9H611 641 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 BCO1Q9HAY6 547 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 FAM53CQ9NYF3 392 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 CHST2Q9Y4C5 530 aa12.52□□□□□ -0.41
SNRPA1-216ENST00000626000 UNC79Q9P2D8 2635 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 KIAA1549Q9HCM3 1950 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 A0A1W2PNR3 127 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 GMNNO75496 209 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 VAMP5O95183 116 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 CNOT4O95628 575 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 OPN1LWP04000 364 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 FESP07332 822 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 YES1P07947 543 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 GTF2E2P29084 291 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 AGTR1P30556 359 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 IFNA8P32881 189 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 ALG10BQ5I7T1 473 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 PAQR6Q6TCH4 344 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 BEND4Q6ZU67 534 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 SSX8Q7RTT4 187 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 TREML1Q86YW5 311 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 MICU2Q8IYU8 434 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 CCDC197Q8NCU1 140 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 FAM222BQ8WU58 562 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 SLC38A4Q969I6 547 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 C3orf49Q96BT1 292 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 SRXN1Q9BYN0 137 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 TRIM8Q9BZR9 551 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 ALG2Q9H553 416 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 ADPRHL2Q9NX46 363 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 NDRG3Q9UGV2 375 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 TAGLN3Q9UI15 199 aa12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 UTP20O75691 2785 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-216ENST00000626000 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 IGKV3D-15A0A087WSY6 115 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 TMEM72A0PK05 275 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 TUBAL3A6NHL2 446 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 TMEM229AB2RXF0 380 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 PRG2P13727 222 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 PPP3CBP16298 524 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 KIR2DL3P43628 341 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 SLC7A2P52569 658 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 SLC16A1P53985 500 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 OR2B6P58173 313 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 SIRPAP78324 504 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 DMTNQ08495 405 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 RASGEF1BQ0VAM2 473 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 NRF1Q16656 503 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 ABLIM2Q6H8Q1 611 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 C8orf82Q6P1X6 216 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 SLC15A3Q8IY34 581 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 SMYD1Q8NB12 490 aa12.5□□□□□ -0.41
SNRPA1-216ENST00000626000 OR6S1Q8NH40 331 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms