RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 HNRNPCL2B2RXH8 293 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 HNRNPCL3B7ZW38 293 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 C16orf97H3BN30 126 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 SULT2B1O00204 365 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 NR5A2O00482 541 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 HNRNPCL1O60812 293 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 SS18L1O75177 396 aaPredicted RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 AQP8O94778 261 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 HTR3BO95264 441 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 BCHEP06276 602 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 HNRNPCL4P0DMR1 293 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 IL11P20809 199 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ENPP1P22413 925 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 PPIBP23284 216 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 PGM1P36871 562 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 IDH2P48735 452 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 CRISP3P54108 245 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 RAC3P60763 192 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 DSTNP60981 165 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 COPZ1P61923 177 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 FAM27E3Q08E93 113 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 LARS2Q15031 903 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 MAPK14Q16539 360 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ZNF239Q16600 458 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 ZSWIM7Q19AV6 140 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 CTU2Q2VPK5 515 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 AGKQ53H12 422 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 HSP90B2PQ58FF3 399 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 SLC25A53Q5H9E4 307 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 PLEKHM3Q6ZWE6 761 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 GRINAQ7Z429 371 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 HMGN2P46Q86SG4 172 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 LURAP1LQ8IV03 231 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ZNF440Q8IYI8 595 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 SLC43A2Q8N370 569 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ZNF610Q8N9Z0 462 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 OR9I1Q8NGQ6 314 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 OR52P1PQ8NH57 321 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 SLC25A43Q8WUT9 341 aaPredicted RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 CKAP2Q8WWK9 683 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ZHX1-C8orf76Q96EF9 292 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ADGRG7Q96K78 797 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 OR5B2Q96R09 309 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 NPAS1Q99742 590 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 EBF4Q9BQW3 602 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 SIKE1Q9BRV8 207 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 RSRP1Q9BUV0 290 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 QRSL1Q9H0R6 528 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 EXOSC3Q9NQT5 275 aaKnown RBP5.71□□□□□ -1.5
TCF4-249ENST00000625716 PLSCR4Q9NRQ2 329 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ACER3Q9NUN7 267 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 TMEM45AQ9NWC5 275 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 CCDC167Q9P0B6 97 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 KCNE5Q9UJ90 142 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 UNC79Q9P2D8 2635 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 ARHGAP21Q5T5U3 1957 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 A0A096LPI6 279 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 A0A0G2JND7 137 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CENPVL1A0A0U1RR11 272 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CFAP73A6NFT4 308 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 EVPLLA8MZ36 301 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CLIC1O00299 241 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 EFNA2O43921 213 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CGAP01215 116 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 YES1P07947 543 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CHRM4P08173 479 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 TROVE2P10155 538 aaKnown RBP eCLIP5.7□□□□□ -1.5
TCF4-249ENST00000625716 ETFAP13804 333 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 PPP3CBP16298 524 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CCNA2P20248 432 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 DNASE1P24855 282 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CXCR1P25024 350 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SHC1P29353 583 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 UGT2B10P36537 528 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 MRPL19P49406 292 aaKnown RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 PCYT1AP49585 367 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CLK1P49759 484 aaKnown RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 ATP4BP51164 291 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 POLR2HP52434 150 aaKnown RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 LINC00310P59036 64 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 RASGEF1BQ0VAM2 473 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 FUT5Q11128 374 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 FADDQ13158 208 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SQLEQ14534 574 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 RGNQ15493 299 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 LIN52Q52LA3 116 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SYT14P1Q58G82 188 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 ZNF311Q5JNZ3 666 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 MRPL2Q5T653 305 aaKnown RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 AP1ARQ63HQ0 302 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SLC2A7Q6PXP3 512 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 ZNF474Q6S9Z5 364 aaPredicted RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 TMPPEQ6ZT21 453 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 ZNF550Q7Z398 422 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CDC20BQ86Y33 519 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 TUSC5Q8IXB3 177 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 RNF128Q8TEB7 428 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SLC38A5Q8WUX1 472 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CNOT9Q92600 299 aaKnown RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 GTF2H4Q92759 462 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms