RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 RNASE1P07998 156 aaKnown RBP11.95□□□□□ -0.5
SNX1-214ENST00000625244 CECR9P0C854 216 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 VSIG8P0DPA2 414 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 ACP2P11117 423 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 PRPS2P11908 318 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 SUMO3P55854 103 aaPredicted RBP11.95□□□□□ -0.5
SNX1-214ENST00000625244 CCDC153Q494R4 210 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 C1QTNF12Q5T7M4 302 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 TSPO2Q5TGU0 170 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 ACSM5Q6NUN0 579 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 RHOUQ7L0Q8 258 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 DOK3Q7L591 496 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 CCDC103Q8IW40 242 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 OR4F15Q8NGB8 312 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 MZB1Q8WU39 189 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 OTUB1Q96FW1 271 aaPredicted RBP11.95□□□□□ -0.5
SNX1-214ENST00000625244 APIPQ96GX9 242 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 GPR78Q96P69 363 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 SHCBP1LQ9BZQ2 653 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 QRSL1Q9H0R6 528 aaKnown RBP11.95□□□□□ -0.5
SNX1-214ENST00000625244 ZMAT3Q9HA38 289 aaKnown RBP11.95□□□□□ -0.5
SNX1-214ENST00000625244 J3QLI3 93 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 ETV2O00321 342 aaPredicted RBP11.94□□□□□ -0.5
SNX1-214ENST00000625244 GPR171O14626 319 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 TSPAN8P19075 237 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 ACHEP22303 614 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 OMGP23515 440 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 MPGP29372 298 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 NTSP30990 170 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 LCN1P31025 176 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 TIA1P31483 386 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNX1-214ENST00000625244 CRHR1P34998 444 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 SLC16A1P53985 500 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 PRKAG1P54619 331 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 CSNK2A1P68400 391 aaPredicted RBP11.94□□□□□ -0.5
SNX1-214ENST00000625244 C2orf80Q0P641 193 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 BAMBIQ13145 260 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 CASP8Q14790 479 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 QPRTQ15274 297 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 DUSP5Q16690 384 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 VPS26BQ4G0F5 336 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 TIGD2Q4W5G0 525 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 ZNF311Q5JNZ3 666 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 Q6ZPA2 131 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 ZNF551Q7Z340 670 aaPredicted RBP11.94□□□□□ -0.5
SNX1-214ENST00000625244 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
SNX1-214ENST00000625244 C4orf33Q8N1A6 199 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 GOLGA6L1Q8N7Z2 621 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 CDRT4Q8N9R6 151 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 RFWD2Q8NHY2 731 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 WFDC12Q8WWY7 111 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 YIPF5Q969M3 257 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 CCDC126Q96EE4 140 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 DNAJA3Q96EY1 480 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 C7orf69Q9H7B7 122 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 ZNF275Q9NSD4 429 aaPredicted RBP11.94□□□□□ -0.5
SNX1-214ENST00000625244 TMEM216Q9P0N5 145 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 ZNF225Q9UK10 706 aa11.94□□□□□ -0.5
SNX1-214ENST00000625244 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 STX16-NPEPL1H3BU86 382 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 MANBAO00462 879 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 STX16O14662 325 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 PPIHO43447 177 aaKnown RBP11.93□□□□□ -0.5
SNX1-214ENST00000625244 MYL2P10916 166 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 ANPEPP15144 967 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 TCN1P20061 433 aaPredicted RBP11.93□□□□□ -0.5
SNX1-214ENST00000625244 TMEM33P57088 247 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 TUBA1BP68363 451 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 TUBA4AP68366 448 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 SLC9B1Q4ZJI4 515 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 KLHL26Q53HC5 615 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNX1-214ENST00000625244 DCAF12L2Q5VW00 463 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 TUBA1AQ71U36 451 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 HDXQ7Z353 690 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 MYPOPQ86VE0 399 aaPredicted RBP11.93□□□□□ -0.5
SNX1-214ENST00000625244 SLC22A9Q8IVM8 553 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 CDC26Q8NHZ8 85 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 PIGXQ8TBF5 258 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 RDH5Q92781 318 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 TMIGD2Q96BF3 282 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 GIMAP5Q96F15 307 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 C16orf58Q96GQ5 468 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 APOPT1Q96IL0 206 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 PKNOX2Q96KN3 472 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 ANKRD27Q96NW4 1050 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 ACPTQ9BZG2 426 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 ZNF665Q9H7R5 613 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 GIN1Q9NXP7 522 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 TAS2R7Q9NYW3 318 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 CRNNQ9UBG3 495 aaPredicted RBP11.93□□□□□ -0.5
SNX1-214ENST00000625244 DNAH9Q9NYC9 4486 aa11.93□□□□□ -0.5
SNX1-214ENST00000625244 VSTM5A8MXK1 200 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 M0QZ24 198 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 NR5A2O00482 541 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 PIN1P1O15428 100 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 OTCP00480 354 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 IGLV1-44P01699 117 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 CELA3BP08861 270 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms