RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y PDLIM4P50479 330 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PHC1P78364 1004 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ARHGAP11BQ3KRB8 267 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y FAM120AOSQ5T036 256 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y HMGN2P46Q86SG4 172 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC35G5Q96KT7 338 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y CCDC106Q9BWC9 280 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y EXD2Q9NVH0 621 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y HDGFL3Q9Y3E1 203 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y NBEAL1Q6ZS30 2694 aa14.19□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC35F4A4IF30 521 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ANKRD28O15084 1053 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y CDH2P19022 906 aaPredicted RBP14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y HNF1AP20823 631 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y THBS2P35442 1172 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ETV4P43268 484 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y MAPK14Q16539 360 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y IQCCQ4KMZ1 466 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y GRINAQ7Z429 371 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y NUDCD3Q8IVD9 361 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y CLECL1Q8IZS7 167 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y XAGE5Q8WWM1 108 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TUBGCP3Q96CW5 907 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PIMREGQ9BSJ6 248 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ZNF350Q9GZX5 532 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y OR51I1Q9H343 314 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC17A5Q9NRA2 495 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC7A10Q9NS82 523 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PARPBPQ9NWS1 579 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y MOKQ9UQ07 419 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC35A3Q9Y2D2 325 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y AMDHD2Q9Y303 409 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y FKBP7Q9Y680 259 aa14.18□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y KIAA0513O60268 411 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y BCAS1O75363 584 aaPredicted RBP14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y OR12D1P0DN82 309 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y G6PDP11413 515 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y APEHP13798 732 aaKnown RBP14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PGM1P36871 562 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y NR4A2P43354 598 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y IDH2P48735 452 aaKnown RBP14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC16A1P53985 500 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PRPS1P60891 318 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC25A3Q00325 362 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TGFBR3Q03167 851 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y MAD2L1Q13257 205 aaPredicted RBP14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y KRT71Q3SY84 523 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ATAD3BQ5T9A4 648 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TSPO2Q5TGU0 170 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y OR4F3Q6IEY1 312 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y KLHL24Q6TFL4 600 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y LSRQ86X29 649 aaPredicted RBP14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ADGRG3Q86Y34 549 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y RIMKLAQ8IXN7 391 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y MREGQ8N565 214 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y OR4A15Q8NGL6 344 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y RAB8BQ92930 207 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y MSI2Q96DH6 328 aaKnown RBP14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ZIM3Q96PE6 472 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y VRK1Q99986 396 aaPredicted RBP14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TMEM181Q9P2C4 612 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PCDHGB4Q9UN71 923 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y WDR45Q9Y484 360 aa14.17□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y KLF11O14901 512 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y RGS16O15492 202 aaPredicted RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y DNPH1O43598 174 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TGFAP01135 160 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y FKBP2P26885 142 aaKnown RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y CLK1P49759 484 aaKnown RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SNRPD2P62316 118 aaKnown RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC35A1P78382 337 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y EMX2Q04743 252 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TYW3Q6IPR3 259 aaKnown RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TNFAIP8L2Q6P589 184 aaPredicted RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y C17orf78Q8N4C9 275 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y ARFGAP2Q8N6H7 521 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y C1orf162Q8NEQ5 155 aaPredicted RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y FOXN4Q96NZ1 517 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SORCS2Q96PQ0 1159 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y NAA11Q9BSU3 229 aaPredicted RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PRR14Q9BWN1 585 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y DCTN4Q9UJW0 460 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SLC9A8Q9Y2E8 581 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y FLVCR1Q9Y5Y0 555 aa14.16□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y TMED7-TICAM2A0A0A6YYA0 188 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y CLDN24A6NM45 220 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y VWC2LB2RUY7 222 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y PDLIM1O00151 329 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y NDUFS8O00217 210 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y EIF1BO60739 113 aaKnown RBP14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y CPSF4O95639 269 aaKnown RBP14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y AGR2O95994 175 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y WNT11O96014 354 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SERPINE1P05121 402 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y CLDN8P56748 225 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y KCNJ10P78508 379 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SWI5Q1ZZU3 235 aa14.15□□□□□ -0.14
CD99-211ENST00000623253_PAR_Y SMU1Q2TAY7 513 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms