RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MED25Q71SY5 747 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 ZNF440Q8IYI8 595 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 TCTE3Q8IZS6 198 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 RFLNBQ8N5W9 214 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 OR4M2Q8NGB6 313 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 OR52E2Q8NGJ4 325 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 OR4C3Q8NH37 302 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 RPS4Y2Q8TD47 263 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 GHSRQ92847 366 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 SMIM19Q96E16 107 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 CNN2Q99439 309 aaKnown RBP8.65□□□□□ -1.02
PDPN-212ENST00000621990 GPR174Q9BXC1 333 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 OR10A5Q9H207 317 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 NRIP3Q9NQ35 241 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 ENAMQ9NRM1 1142 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 LRIT1Q9P2V4 623 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 EXTL2Q9UBQ6 330 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 RASD1Q9Y272 281 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 NUP210LQ5VU65 1888 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 ANKRD61A6NGH8 418 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 SERPINA3P01011 423 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 EIF4EP06730 217 aaKnown RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 MAZP56270 477 aaKnown RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 OR10A3P58181 314 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 MAT1AQ00266 395 aaKnown RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 SLC3A1Q07837 685 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 BIKQ13323 160 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 CDK5R1Q15078 307 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 TATDN3Q17R31 274 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 SLC35D3Q5M8T2 416 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 TIGD3Q6B0B8 471 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 PAMR1Q6UXH9 720 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 RPTNQ6XPR3 784 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 SYT13Q7L8C5 426 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 LIX1LQ8IVB5 337 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 CADM2Q8N3J6 435 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 ARL14Q8N4G2 192 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 Q8N9G6 341 aaPredicted RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 NPEPL1Q8NDH3 523 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 CAPSLQ8WWF8 208 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 LIPHQ8WWY8 451 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 C3orf49Q96BT1 292 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 UPRTQ96BW1 309 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 MAP3K3Q99759 626 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 PELOQ9BRX2 385 aaKnown RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 RPS6KB2Q9UBS0 482 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 RBMX2Q9Y388 322 aaKnown RBP8.65□□□□□ -1.03
PDPN-212ENST00000621990 ZNF337Q9Y3M9 751 aa8.65□□□□□ -1.03
PDPN-212ENST00000621990 BRWD1Q9NSI6 2320 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 TDRD6O60522 2096 aaKnown RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 IGKV1D-42A0A075B6H8 117 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CENPXA8MT69 81 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 H0YIG0 161 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 SLC43A1O75387 559 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CDC123O75794 336 aaPredicted RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 OR7A10O76100 309 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CSTAP01040 98 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 TFPIP10646 304 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 PSKH1P11801 424 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 NME1P15531 152 aaKnown RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 MAOAP21397 527 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 SLC6A1P30531 599 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 PYCR1P32322 319 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 PITPNBP48739 271 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 DIO1P49895 249 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 RPS11P62280 158 aaKnown RBP eCLIP8.64□□□□□ -1.03
PDPN-212ENST00000621990 MADCAM1Q13477 382 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 IL10RAQ13651 578 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CCDC58Q4VC31 144 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 ACSM3Q53FZ2 586 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 HACD4Q5VWC8 232 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 LRRC17Q8N6Y2 441 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 SDR9C7Q8NEX9 313 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 OR7G1Q8NGA0 311 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 OR4M1Q8NGD0 313 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 SMAP2Q8WU79 429 aaPredicted RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 PELI1Q96FA3 418 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 TRAF4Q9BUZ4 470 aaPredicted RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 EXOSC3Q9NQT5 275 aaKnown RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 NUFIP1Q9UHK0 495 aaKnown RBP8.64□□□□□ -1.03
PDPN-212ENST00000621990 PLCL2Q9UPR0 1127 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 ERVK-19Q9WJR5 959 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 IER3IP1Q9Y5U9 82 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 THADAQ6YHU6 1953 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 HEATR5AQ86XA9 2040 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 FAM25AB3EWG3 89 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 FAM25CB3EWG5 89 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 FAM25GB3EWG6 89 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CHURC1-FNTBB4DL54 471 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 PROS1P07225 676 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 TALDO1P37837 337 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 FNTBP49356 437 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 SERTAD2Q14140 314 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CDK10Q15131 360 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 NDUFAF6Q330K2 333 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 CEP78Q5JTW2 689 aa8.64□□□□□ -1.03
PDPN-212ENST00000621990 ZNF687Q8N1G0 1237 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms