RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PCM1Q15154 2024 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PATE3B3GLJ2 98 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 STK17BO94768 372 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 ETHE1O95571 254 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MPIG6BO95866 241 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MT-CO3P00414 261 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 GTF2F2P13984 249 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 GPR3P46089 330 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MAN2A2P49641 1150 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 POLR2HP52434 150 aaKnown RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 GABREP78334 506 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MESP2Q0VG99 397 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 CDK5R2Q13319 367 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 GPNMBQ14956 572 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 DUSP7Q16829 419 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 CPEB2Q7Z5Q1 589 aaKnown RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 CDH24Q86UP0 819 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PLCZ1Q86YW0 608 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 ZNF584Q8IVC4 421 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MISPQ8IVT2 679 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 SLC35F2Q8IXU6 374 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 ABHD11Q8NFV4 315 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 ZNF566Q969W8 418 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 SPNS1Q9H2V7 528 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PRDM6Q9NQX0 595 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 DUSP22Q9NRW4 184 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 DUSP13Q9UII6 198 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PPT2Q9UMR5 302 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 DIDO1Q9BTC0 2240 aaKnown RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 CREBBPQ92793 2442 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 COL5A3P25940 1745 aaPredicted RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 TMEM269A0A1B0GVZ9 245 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 MOSPD3O75425 235 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 PRH1P02810 166 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 CELA2BP08218 269 aaPredicted RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 GPX2P18283 190 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 CFL1P23528 166 aaKnown RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 CEBPGP53567 150 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 FAM53BQ14153 422 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 KCTD9Q7L273 389 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 TRAPPC6BQ86SZ2 158 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 ZNF683Q8IZ20 524 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 C16orf52Q8NHV5 167 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 GPR148Q8TDV2 347 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 GAB3Q8WWW8 586 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 TAMM41Q96BW9 452 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 EID2BQ96D98 161 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SCGB3A2Q96PL1 93 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 PIGQQ9BRB3 760 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 ACTR6Q9GZN1 396 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SLC5A7Q9GZV3 580 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SLC22A4Q9H015 551 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 MED20Q9H944 212 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SLC6A20Q9NP91 592 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 PAK1IP1Q9NWT1 392 aaPredicted RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 C14orf166Q9Y224 244 aaKnown RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 FAM230AA0A1W2PPH8 454 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 ZNF850A8MQ14 1090 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 GPR171O14626 319 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 DSCR3O14972 297 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 FCMRO60667 390 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SLC43A1O75387 559 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 TSPAN12O95859 305 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 DBHP09172 617 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 EPHA8P29322 1005 aaPredicted RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 HTR5AP47898 357 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 BIDP55957 195 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 WNT4P56705 351 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 MELKQ14680 651 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 CHRFAM7AQ494W8 412 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 YOD1Q5VVQ6 348 aaPredicted RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 OR7G1Q8NGA0 311 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 HINT2Q9BX68 163 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SYT4Q9H2B2 425 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 AGPAT4Q9NRZ5 378 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 FBXL3Q9UKT7 428 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 C19orf53Q9UNZ5 99 aaPredicted RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 PCDHGA8Q9Y5G5 932 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 WIF1Q9Y5W5 379 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 COL24A1Q17RW2 1714 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 A0A1B0GTL3 188 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 RFPL3O75679 317 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 RAB3BP20337 219 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SLC2A5P22732 501 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 GNRHRP30968 328 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 TRIM23P36406 574 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 EIF1P41567 113 aaKnown RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 TSPAN31Q12999 210 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 LSAMPQ13449 338 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 RUNX2Q13950 521 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SF3A2Q15428 464 aaKnown RBP8.55□□□□□ -1.04
GGA3-223ENST00000621870 AWAT2Q6E213 333 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 TUBA3EQ6PEY2 450 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 MARVELD2Q8N4S9 558 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 OR7G2Q8NG99 324 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 OR4F15Q8NGB8 312 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 TCEAL3Q969E4 200 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 IP6K3Q96PC2 410 aa8.55□□□□□ -1.04
GGA3-223ENST00000621870 SDF2Q99470 211 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms