RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PDLIM5Q96HC4 596 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-211ENST00000621271 MED18Q9BUE0 208 aa9.12□□□□□ -0.95
CLTCL1-211ENST00000621271 DEFB127Q9H1M4 99 aa9.12□□□□□ -0.95
CLTCL1-211ENST00000621271 RANBP3Q9H6Z4 567 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-211ENST00000621271 FOLH1BQ9HBA9 442 aa9.12□□□□□ -0.95
CLTCL1-211ENST00000621271 ERVK13-1Q9NX77 482 aa9.12□□□□□ -0.95
CLTCL1-211ENST00000621271 TMEM269A0A1B0GVZ9 245 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 A0A1W2PQ09 198 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 TCRBV3S1A0A5B6 114 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 UPK1BO75841 260 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 UTS2O95399 124 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ATXN1LP0C7T5 689 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 SLC35E2P0CK97 266 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 CAPN3P20807 821 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 CDK2P24941 298 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 GK3PQ14409 553 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 MICAQ29983 383 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 MED25Q71SY5 747 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ZNF695Q8IW36 515 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 METTL4Q8N3J2 472 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 LSM14AQ8ND56 463 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 MBNL1Q9NR56 388 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 TAS2R8Q9NYW2 309 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 HHLA2Q9UM44 414 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 TIMM8BQ9Y5J9 83 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 TRAV6A0A075B6T7 132 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 SERINC4A6NH21 518 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ENSAO43768 121 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 STSP08842 583 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 CD1CP29017 333 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 IMPA1P29218 277 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 GABREP78334 506 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 UGT8Q16880 541 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ZNF684Q5T5D7 378 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 SLC41A2Q96JW4 573 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ZNF587Q96SQ5 575 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 GSTO2Q9H4Y5 243 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ELOVL3Q9HB03 270 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 SDR39U1Q9NRG7 319 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 R4GN57 208 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 PMS2P1A4D2B8 440 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 MRPS14O60783 128 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 LSSP48449 732 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 RFLNAQ6ZTI6 216 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 LMNTD1Q8N9Z9 388 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 NETO1Q8TDF5 533 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 FGF14Q92915 247 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 EMCNQ9ULC0 261 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 NME7Q9Y5B8 376 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 CSNK1G3Q9Y6M4 447 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 TRAV18A0A075B6X5 111 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 CLCA1A8K7I4 914 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 EPHA1P21709 976 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ADRA1AP35348 466 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 HTR2BP41595 481 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 SLC10A1Q14973 349 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 HLA-BQ31612 363 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 BCL7AQ4VC05 210 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 MRPL2Q5T653 305 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 PIP5KL1Q5T9C9 394 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 CPZQ66K79 652 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 CYP4V2Q6ZWL3 525 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 FAM57BQ71RH2 274 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 VRK2Q86Y07 508 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 PLPP6Q8IY26 295 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 Q8N402 240 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ADAMTS16Q8TE57 1224 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 SPIN2AQ99865 258 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 SPIN2BQ9BPZ2 258 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 ALG8Q9BVK2 526 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 MYEF2Q9P2K5 600 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 GNG12Q9UBI6 72 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 RABL2AQ9UBK7 228 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 UBQLN2Q9UHD9 624 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 RABL2BQ9UNT1 228 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 MED16Q9Y2X0 877 aa9.11□□□□□ -0.95
CLTCL1-211ENST00000621271 TRAV27A0A087WT01 109 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 GLB1P16278 677 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 MAOAP21397 527 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 IL3RAP26951 378 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 REEP5Q00765 189 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 SEMA3BQ13214 749 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 LTB4RQ15722 352 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 TBC1D28Q2M2D7 210 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 HAGHLQ6PII5 290 aaPredicted RBP9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 FAM111BQ6SJ93 734 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 SYT13Q7L8C5 426 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 ADGRG5Q8IZF4 528 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 EXD3Q8N9H8 876 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 DEFB124Q8NES8 71 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 ZFP57Q9NU63 452 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 AGAP5A6NIR3 686 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 AMY2AP04746 511 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 C9orf152Q5JTZ5 239 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 ENTPD8Q5MY95 495 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 SLC6A19Q695T7 634 aa9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 ZNF300Q96RE9 604 aaPredicted RBP9.1□□□□□ -0.95
CLTCL1-211ENST00000621271 FKRPQ9H9S5 495 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms