RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FLRT2O43155 660 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 MT-ND5P03915 603 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 C6P13671 934 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ADRB3P13945 408 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ATF1P18846 271 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 RAB3BP20337 219 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 DRD1P21728 446 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 GJA4P35212 333 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 GDNFP39905 211 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PSMB10P40306 273 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 MC3RP41968 323 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PRLHRP49683 370 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZP1P60852 638 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 DUSP2Q05923 314 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF33BQ06732 778 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TSPAN31Q12999 210 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 SMCO1Q147U7 214 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 NDUFA9Q16795 377 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 EIPR1Q53HC9 387 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 C6orf132Q5T0Z8 1188 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 AADACL4Q5VUY2 407 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR5M10Q6IEU7 315 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FAM198BQ6UWH4 519 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 C3P1Q6ZMU1 363 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PAQR7Q86WK9 346 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR2L5Q8NG80 312 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR5J2Q8NH18 312 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FAM3CQ92520 227 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF689Q96CS4 500 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF559Q9BR84 538 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF436Q9C0F3 470 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ARL6Q9H0F7 186 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PPA2Q9H2U2 334 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 UBQLN3Q9H347 655 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 EMC7Q9NPA0 242 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PRDM9Q9NQV7 894 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 USP36Q9P275 1121 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 HEBP2Q9Y5Z4 205 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TRAV27A0A087WT01 109 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 EIF1AYO14602 144 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ITGA10O75578 1167 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 SPDEFO95238 335 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 HOXD4P09016 255 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CTRB1P17538 263 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 F8A1P23610 371 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TEAD1P28347 426 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 BSGP35613 385 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 RAD52P43351 418 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PSMA6P60900 246 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 HTRA4P83105 476 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ENPP2Q13822 863 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PGGHGQ32M88 737 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CD276Q5ZPR3 534 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TMEM215Q68D42 235 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CTRB2Q6GPI1 263 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PYHIN1Q6K0P9 492 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FAM122CQ6P4D5 195 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FIGNL1Q6PIW4 674 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 APOOLQ6UXV4 268 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 RFLNBQ8N5W9 214 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 POGLUT1Q8NBL1 392 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 RELL2Q8NC24 303 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF485Q8NCK3 441 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 SGTBQ96EQ0 304 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 AMDHD1Q96NU7 426 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 NKX3-1Q99801 234 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 IFT46Q9NQC8 304 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CA10Q9NS85 328 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 LYARQ9NX58 379 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 NOP16Q9Y3C1 178 aaKnown RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 NUBP2Q9Y5Y2 271 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 MEIS3P1A6NDR6 274 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 IGLON5A6NGN9 336 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FAM171A2A8MVW0 826 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 WASH3PC4AMC7 463 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 SERPINA3P01011 423 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PRH1P02810 166 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF806P0C7X5 589 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 NDUFV2P19404 249 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 NPR2P20594 1047 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 NDUFS1P28331 727 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 EFNB1P98172 346 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 ALG11Q2TAA5 492 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 AMZ1Q400G9 498 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 KLHL26Q53HC5 615 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CLLU1Q5K131 121 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 METTL27Q8N6F8 245 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR9A2Q8NGT5 310 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 PFN4Q8NHR9 129 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OSTF1Q92882 214 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 OR2M2Q96R28 347 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 AIFM2Q9BRQ8 373 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 RAB11FIP5Q9BXF6 653 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 EXO5Q9H790 373 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 FBRSQ9HAH7 460 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 TRPV4Q9HBA0 871 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 C20orf141Q9NUB4 165 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 CYP8B1Q9UNU6 501 aa6.45□□□□□ -1.38
NEDD9-216ENST00000620854 LIPT1Q9Y234 373 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms