RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 NDUFAF7Q7L592 441 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 ARNTLO00327 626 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SSTR4P31391 388 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 EIF1P41567 113 aaKnown RBP10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SLC30A3Q99726 388 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 METTL9Q9H1A3 318 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 MEIS3P1A6NDR6 274 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 PRRG2O14669 202 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 CTNSO60931 367 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF616Q08AN1 781 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 STEAP2Q8NFT2 490 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 UBTD2Q8WUN7 234 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SLC19A3Q9BZV2 496 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 DEFB127Q9H1M4 99 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 HIPK2Q9H2X6 1198 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 FGF22Q9HCT0 170 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF355PQ9NSJ1 428 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 OLAHQ9NV23 265 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 MAGED1Q9Y5V3 778 aaPredicted RBP10.58□□□□□ -0.72
CLIP1-219ENST00000620786 MYH7P12883 1935 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 EIF1BO60739 113 aaKnown RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 CD1CP29017 333 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 CAV2P51636 162 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SEMA3BQ13214 749 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 MTFR2Q6P444 385 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 ETFBKMTQ8IXQ9 262 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 OR1N1Q8NGS0 311 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 QRSL1Q9H0R6 528 aaKnown RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 RLIMQ9NVW2 624 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 TBX21Q9UL17 535 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 HMX3A6NHT5 357 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF593O00488 134 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 DVL2O14641 736 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 TOXO94900 526 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 CAMLGP49069 296 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 CCR5P51681 352 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 TBC1D28Q2M2D7 210 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 HAGHLQ6PII5 290 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 RSPO2Q6UXX9 243 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SLC16A9Q7RTY1 509 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 OR5M1Q8NGP8 315 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 ITFG2Q969R8 447 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SORCS2Q96PQ0 1159 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 ZDHHC5Q9C0B5 715 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 APMAPQ9HDC9 416 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 PRMT8Q9NR22 394 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 FAM183AA6NL82 134 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 GABBR2O75899 941 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 ETV4P43268 484 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 RAB40BQ12829 278 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 LILRA3Q8N6C8 439 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 MSI2Q96DH6 328 aaKnown RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SPIN2AQ99865 258 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SPIN2BQ9BPZ2 258 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 FUNDC2Q9BWH2 189 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 RGCCQ9H4X1 137 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 CNOT11Q9UKZ1 510 aaKnown RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 EMCNQ9ULC0 261 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 PRRT4C9JH25 899 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 FCGR2AP12318 317 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 LIM2P55344 173 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 PROX2Q3B8N5 592 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 ACSM3Q53FZ2 586 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 PYCR3Q53H96 274 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 HENMT1Q5T8I9 393 aaKnown RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 AGAP7PQ5VUJ5 663 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 C6orf89Q6UWU4 347 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 COMTD1Q86VU5 262 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 TM4SF18Q96CE8 201 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 BOD1Q96IK1 185 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 MAELQ96JY0 434 aaKnown RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 AGAP4Q96P64 663 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 EGLN3Q9H6Z9 239 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 NME7Q9Y5B8 376 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SLC22A7Q9Y694 548 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 TRPM3Q9HCF6 1732 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 METTL15A6NJ78 407 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 OR8U9P0C7N5 309 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 BMP2P12643 396 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 CSNK1G2P78368 415 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF750Q32MQ0 723 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 AKR1C8PQ5T2L2 129 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 CBLL1Q75N03 491 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 B3GNT7Q8NFL0 401 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 OR4N2Q8NGD1 307 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 GOT1L1Q8NHS2 421 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SUN5Q8TC36 379 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 UBXN10Q96LJ8 280 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 SYT11Q9BT88 431 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 TSPAN10Q9H1Z9 355 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-219ENST00000620786 C1orf198Q9H425 327 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 TBC1D29Q9UFV1 150 aa10.57□□□□□ -0.72
CLIP1-219ENST00000620786 hCG_1809904A0A1W2PP81 198 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 A0A1W2PPE2 198 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 A0A1W2PR64 198 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 A0A1W2PRV1 198 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 HSPB6O14558 160 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms