RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ADAP00813 363 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 ZNF17P17021 662 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 GDF1P27539 372 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 GSSP48637 474 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 CLK1P49759 484 aaKnown RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 B3GALT5-AS1P59052 145 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 EGR4Q05215 589 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 FOXF1Q12946 379 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 TSPAN31Q12999 210 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 TOMM20Q15388 145 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 PLEKHN1Q494U1 663 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 LINC01559Q495D7 138 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 RPUSD3Q6P087 351 aaKnown RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 POMZP3Q6PJE2 187 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 C5orf46Q6UWT4 87 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 CD300LDQ6UXZ3 194 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 ASB18Q6ZVZ8 466 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 YRDCQ86U90 279 aaKnown RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 SLC22A16Q86VW1 577 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 P3H2Q8IVL5 708 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 AQP11Q8NBQ7 271 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 FAM83FQ8NEG4 500 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 OR9Q2Q8NGE9 314 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 OR5M1Q8NGP8 315 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 OR14L1PQ8NHC6 308 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 DNAJC9Q8WXX5 260 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 GPA33Q99795 319 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 NIPSNAP1Q9BPW8 284 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 PIGQQ9BRB3 760 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 UCK2Q9BZX2 261 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 ADNPQ9H2P0 1102 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 VCXQ9H320 206 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 ZNF556Q9HAH1 456 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 ACKR4Q9NPB9 350 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 KRCC1Q9NPI7 259 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 CHRNA9Q9UGM1 479 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 TMEFF2Q9UIK5 374 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 DKKL1Q9UK85 242 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 ZMIZ1Q9ULJ6 1067 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 B3GNT3Q9Y2A9 372 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 TMEM5Q9Y2B1 443 aa7.25□□□□□ -1.25
CPNE3-209ENST00000620393 RPH3AQ9Y2J0 694 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-209ENST00000620393 TRAV36DV7A0A075B6V5 113 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 ZC3H12DA2A288 527 aaKnown RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 FAM166BA8MTA8 275 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 DLGAP1O14490 977 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 KLF4O43474 513 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 OR2T1O43869 369 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 MITFO75030 526 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 PTP4A3O75365 173 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 IFI30P13284 250 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 POU2F1P14859 743 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 FUT1P19526 365 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 MAKP20794 623 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 IL11P20809 199 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 GSTM3P21266 225 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 TCEA1P23193 301 aaKnown RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 CHMP24386 653 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 FPR3P25089 353 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 ELK4P28324 431 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 RFC3P40938 356 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 MAGEA5P43359 124 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 RAD23AP54725 363 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 RAC1P63000 192 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 FOXK2Q01167 660 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 LTBQ06643 244 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 CRYZQ08257 329 aaKnown RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 SELENBP1Q13228 472 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 TUSC1Q2TAM9 212 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 RFX4Q33E94 735 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 TMEM176BQ3YBM2 270 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 RNFT1Q5M7Z0 435 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 WIPI1Q5MNZ9 446 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 C1orf140Q5VVS0 124 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 C1QL3Q5VWW1 255 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 RAET1LQ5VY80 246 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 MEX3DQ86XN8 651 aaKnown RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 PARP8Q8N3A8 854 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 FAM109AQ8N4B1 249 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 ZNF511Q8NB15 262 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 OR6S1Q8NH40 331 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 PFN4Q8NHR9 129 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 C9orf43Q8TAL5 461 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 SLC25A43Q8WUT9 341 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 LIPHQ8WWY8 451 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 TAAR8Q969N4 342 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 GTPBP3Q969Y2 492 aaKnown RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 DDIT4LQ96D03 193 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 BPIFA2Q96DR5 249 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 KTI12Q96EK9 354 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 SGTBQ96EQ0 304 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 CRELD1Q96HD1 420 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 FAM46AQ96IP4 442 aaKnown RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 RDH12Q96NR8 316 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 UBL7Q96S82 380 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 ARHGAP9Q9BRR9 750 aa7.24□□□□□ -1.25
CPNE3-209ENST00000620393 ZNF703Q9H7S9 590 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 PAPOLBQ9NRJ5 636 aaKnown RBP7.24□□□□□ -1.25
CPNE3-209ENST00000620393 C20orf141Q9NUB4 165 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms