RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 PLA2G3Q9NZ20 509 aa19.68■□□□□ 0.74
SGMS1-210ENST00000619438 CCDC59Q9P031 241 aaKnown RBP19.68■□□□□ 0.74
SGMS1-210ENST00000619438 ANKRD33BA6NCL7 494 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 SNTNA6NMZ2 147 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 CBX7O95931 251 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 CT62P0C5K7 136 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 IDUAP35475 653 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 POU6F2P78424 691 aaPredicted RBP19.67■□□□□ 0.74
SGMS1-210ENST00000619438 MED22Q15528 200 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 IGFBP7Q16270 282 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 SNAPC1Q16533 368 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 KLHL22Q53GT1 634 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 Q6ZS92 163 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 IGFN1Q86VF2 1251 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 MFSD4AQ8N468 514 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 NANOGP1Q8N7R0 232 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 POGLUT1Q8NBL1 392 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 CPT1CQ8TCG5 803 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 SLC38A2Q96QD8 506 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 NXF2Q9GZY0 626 aaKnown RBP19.67■□□□□ 0.74
SGMS1-210ENST00000619438 ARMC7Q9H6L4 198 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 MED17Q9NVC6 651 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 CSAG2Q9Y5P2 127 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 FLNCQ14315 2725 aa19.67■□□□□ 0.74
SGMS1-210ENST00000619438 TRAPPC13A5PLN9 417 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 CDHR4A6H8M9 788 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 F10P00742 488 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 GRK5P34947 590 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 GPR68Q15743 365 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 MAPK14Q16539 360 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 TMEM44Q2T9K0 475 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 CCNJQ5T5M9 372 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 FCRLBQ6BAA4 426 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 RNF113BQ8IZP6 322 aaKnown RBP19.66■□□□□ 0.74
SGMS1-210ENST00000619438 VWA5B2Q8N398 1253 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 OR8D4Q8NGM9 314 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 FAM46AQ96IP4 442 aaKnown RBP19.66■□□□□ 0.74
SGMS1-210ENST00000619438 LRR1Q96L50 414 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 LMF2Q9BU23 707 aaKnown RBP19.66■□□□□ 0.74
SGMS1-210ENST00000619438 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.66■□□□□ 0.748e-7■■■■□ 20.6
SGMS1-210ENST00000619438 EGLN3Q9H6Z9 239 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 FGF20Q9NP95 211 aaPredicted RBP19.66■□□□□ 0.74
SGMS1-210ENST00000619438 TBCCD1Q9NVR7 557 aa19.66■□□□□ 0.74
SGMS1-210ENST00000619438 CENPVL1A0A0U1RR11 272 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 SYNDIG1LA6NDD5 238 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 METTL15A6NJ78 407 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 SAGE2PA6NJ88 616 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 KDM4EB2RXH2 506 aaPredicted RBP19.65■□□□□ 0.74
SGMS1-210ENST00000619438 J3QRK9 145 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 PRODHO43272 600 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 S1PR1P21453 382 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 HOXC5Q00444 222 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 SPHARQ15513 63 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 GDPGP1Q6ZNW5 385 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 TMCO5AQ8N6Q1 288 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 Q8NA96 180 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 GPR151Q8TDV0 419 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 CHPT1Q8WUD6 406 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 PIK3R3Q92569 461 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 HAS2Q92819 552 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 OPALINQ96PE5 141 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 OR51E2Q9H255 320 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 ABI3Q9P2A4 366 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 KCNE5Q9UJ90 142 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 CLCA3PQ9Y6N3 262 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 RELNP78509 3460 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 NBASA2RRP1 2371 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 WISP1O95388 367 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 RAB36O95755 333 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 RAB40BQ12829 278 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 SERTAD2Q14140 314 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 EXOSC7Q15024 291 aaKnown RBP19.65■□□□□ 0.74
SGMS1-210ENST00000619438 INPP5JQ15735 1006 aaPredicted RBP19.65■□□□□ 0.74
SGMS1-210ENST00000619438 TSTQ16762 297 aaKnown RBP19.65■□□□□ 0.74
SGMS1-210ENST00000619438 ACER2Q5QJU3 275 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 MRPL2Q5T653 305 aaKnown RBP19.65■□□□□ 0.74
SGMS1-210ENST00000619438 CYP4Z2PQ8N1L4 340 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 OR52I1Q8NGK6 324 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 OR1N1Q8NGS0 311 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 PRSS27Q9BQR3 290 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 TEX12Q9BXU0 123 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 DSN1Q9H410 356 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 CNIH4Q9P003 139 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 NTNG1Q9Y2I2 539 aa19.65■□□□□ 0.74
SGMS1-210ENST00000619438 CNTRLQ7Z7A1 2325 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 OR10H2O60403 315 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 SULT1C4O75897 302 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 LYPD3O95274 346 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 WDPCPO95876 746 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 HSMCR30P0CW71 290 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 GABRA3P34903 492 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 GAS1P54826 345 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 ZNF169Q14929 603 aaPredicted RBP19.64■□□□□ 0.73
SGMS1-210ENST00000619438 SSX1Q16384 188 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 ZNF404Q494X3 552 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 H3F3CQ6NXT2 135 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 ZNF620Q6ZNG0 422 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 NRMQ8IXM6 262 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 SLC34A3Q8N130 599 aa19.64■□□□□ 0.73
SGMS1-210ENST00000619438 CISD2Q8N5K1 135 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms