RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 FRG2CA6NGY1 282 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 EFCAB7A8K855 629 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 D6RAR5 112 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 POLR1CO15160 346 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 SSX4O60224 188 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 CD59P13987 128 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 NOS3P29474 1203 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 HTR1FP30939 366 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 RBM34P42696 430 aaKnown RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 GPR143P51810 404 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 PSMD4P55036 377 aaKnown RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 SKP2Q13309 424 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 RSBN1Q5VWQ0 802 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 RHBDD2Q6NTF9 364 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 TMPRSS11AQ6ZMR5 421 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 CXXC5Q7LFL8 322 aaKnown RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 CHAC2Q8WUX2 184 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 OR6C1Q96RD1 312 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 GAL3ST4Q96RP7 486 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 BARHL1Q9BZE3 327 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 UBQLN4Q9NRR5 601 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 YARS2Q9Y2Z4 477 aaKnown RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 NUP210LQ5VU65 1888 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 HEATR5AQ86XA9 2040 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 COL5A1P20908 1838 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 A0A087WUJ7 227 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 TTC36A6NLP5 189 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 HMGN1P05114 100 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 ZNF883P0CG24 379 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 CLUP10909 449 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 ADH7P40394 386 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 CLDN6P56747 220 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 CCDC92Q53HC0 331 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-209ENST00000617930 PWWP2BQ6NUJ5 590 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 SETD6Q8TBK2 473 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 ASB15Q8WXK1 588 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 PMEPA1Q969W9 287 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 IFT27Q9BW83 186 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 HOXD1Q9GZZ0 328 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 TMEM5Q9Y2B1 443 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 CMAHPQ9Y471 501 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 C2orf92A0A1B0GVN3 265 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 TMEM129A0AVI4 362 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 ICOSLGO75144 302 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 CCNKO75909 580 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 PPP1R3DO95685 299 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 BMP7P18075 431 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 OR2B6P58173 313 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 PSPHP78330 225 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 MXD1Q05195 221 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 GXYLT1Q4G148 440 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 AGAP6Q5VW22 663 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 LCN10Q6JVE6 187 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 NIPAL3Q6P499 406 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 OAFQ86UD1 273 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 LAX1Q8IWV1 398 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 CDK20Q8IZL9 346 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 STT3BQ8TCJ2 826 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 OTULINQ96BN8 352 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 AGAP4Q96P64 663 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 GFM1Q96RP9 751 aaKnown RBP16■□□□□ 0.15
CNOT3-209ENST00000617930 PRRG3Q9BZD7 231 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 MOV10Q9HCE1 1003 aaKnown RBP16■□□□□ 0.15
CNOT3-209ENST00000617930 TBC1D24Q9ULP9 559 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 ICAM5Q9UMF0 924 aa16■□□□□ 0.15
CNOT3-209ENST00000617930 SF3B6Q9Y3B4 125 aaKnown RBP16■□□□□ 0.15
CNOT3-209ENST00000617930 CDRT1O95170 752 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 RCBTB2O95199 551 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 IGHA1P01876 353 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 KRT8P05787 483 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 MYL12AP19105 171 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 AZGP1P25311 298 aaKnown RBP15.99■□□□□ 0.15
CNOT3-209ENST00000617930 SLC1A3P43003 542 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 GRK6P43250 576 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 NKX2-5P52952 324 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-209ENST00000617930 WNT4P56705 351 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 ARMC4Q5T2S8 1044 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 ZNF544Q6NX49 715 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 C16orf47Q6ZP98 133 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-209ENST00000617930 ZNF441Q8N8Z8 693 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 PLPP5Q8NEB5 264 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 IL17RDQ8NFM7 739 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 OR1N1Q8NGS0 311 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 NACC2Q96BF6 587 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 CTRCQ99895 268 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 SIAEQ9HAT2 523 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 MKKSQ9NPJ1 570 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-209ENST00000617930 CMC2Q9NRP2 79 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 SLC35A3Q9Y2D2 325 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 V9GYH0 126 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 CCDC182A6NF36 153 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 LDOC1O95751 146 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-209ENST00000617930 TSPAN19P0C672 248 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 CPEP16870 476 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 NR0B1P51843 470 aaKnown RBP15.99■□□□□ 0.15
CNOT3-209ENST00000617930 TCF15Q12870 199 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 BCL2A1Q16548 175 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 PHF19Q5T6S3 580 aa15.99■□□□□ 0.15
CNOT3-209ENST00000617930 YOD1Q5VVQ6 348 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-209ENST00000617930 CYB561A3Q8NBI2 242 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms