RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LINC00299Q6ZSB3 139 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 TMEM99Q8N816 258 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZFP41Q8N8Y5 198 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 TMEM203Q969S6 136 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 DTNBP1Q96EV8 351 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 SPSB2Q99619 263 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ARHGAP9Q9BRR9 750 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 CDADC1Q9BWV3 514 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 HMG20AQ9NP66 347 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 CCDC59Q9P031 241 aaKnown RBP15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 YARS2Q9Y2Z4 477 aaKnown RBP15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 MEN1O00255 615 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 ONECUT2O95948 504 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 LALBAP00709 142 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 FGF5P12034 268 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 HIST1H1CP16403 213 aaKnown RBP15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 RPL4P36578 427 aaKnown RBP15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC6A8P48029 635 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 EGR4Q05215 589 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF846Q147U1 533 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 FAM69BQ5VUD6 431 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC43A2Q8N370 569 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 MFSD4AQ8N468 514 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 C10orf53Q8N6V4 93 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 SDR9C7Q8NEX9 313 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR52E2Q8NGJ4 325 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR4K13Q8NH42 304 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 C8orf44Q96CB5 159 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 CCNL2Q96S94 520 aaPredicted RBP15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 TBX5Q99593 518 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 TEAD3Q99594 435 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 WDR77Q9BQA1 342 aaPredicted RBP15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 TMEM43Q9BTV4 400 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 CRB3Q9BUF7 120 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 C12orf71A8MTZ7 269 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF354AO60765 605 aaPredicted RBP15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 IFNGP01579 166 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF28P17035 718 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC2A5P22732 501 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 EVI2BP34910 448 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 KLHL36Q8N4N3 616 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 DACH2Q96NX9 599 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 MOGAT1Q96PD6 335 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 RERGLQ9H628 205 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 TOR4AQ9NXH8 423 aa15.82■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC22A31A6NKX4 558 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 FADS1O60427 444 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 NUDT14O95848 222 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 MRPL3P09001 348 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 RPS25P62851 125 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 TPBGQ13641 420 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF74Q16587 644 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 POMZP3Q6PJE2 187 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 BMPERQ8N8U9 685 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 FAM98AQ8NCA5 519 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 MOSPD2Q8NHP6 518 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 SPRYD4Q8WW59 207 aaPredicted RBP15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 S100ZQ8WXG8 99 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 UFD1Q92890 307 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 JAM3Q9BX67 310 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 ASPNQ9BXN1 380 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 C6orf62Q9GZU0 229 aaPredicted RBP15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 ADAM19Q9H013 955 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 MMP27Q9H306 513 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 ISYNA1Q9NPH2 558 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 SSR3Q9UNL2 185 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 NPFFR2Q9Y5X5 522 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 CFAP54Q96N23 3096 aa15.81■□□□□ 0.12
PCDHGC3-205ENST00000617641 TRBV11-1A0A0K0K1C0 115 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 EIF4E2O60573 245 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 CPNE3O75131 537 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 WISP1O95388 367 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 SP9P0CG40 484 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 CCL4P13236 92 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 NRG3P56975 720 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 RPS4XP62701 263 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 IL11RAQ14626 422 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 CLPPQ16740 277 aaPredicted RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 DPY19L2P2Q6ZN68 376 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 GDPGP1Q6ZNW5 385 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 CPEB2Q7Z5Q1 589 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 ACBD7Q8N6N7 88 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZBTB44Q8NCP5 570 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 TP53INP1Q96A56 240 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 WDR12Q9GZL7 423 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 KLHL1Q9NR64 748 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR6C70A6NIJ9 312 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 BLOC1S5-TXNDC5H3BN57 136 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 PLD2O14939 933 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 GRK6P43250 576 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZFP36L1Q07352 338 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 INAQ16352 499 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 FAM199XQ6PEV8 388 aaPredicted RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 GHDCQ8N2G8 530 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 AGBL5Q8NDL9 886 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR10H4Q8NGA5 316 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR52N1Q8NH53 320 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR5W2Q8NH69 310 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 PMEPA1Q969W9 287 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 KTI12Q96EK9 354 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms