RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
TNFRSF11A-206ENST00000617039 LRRC69Q6ZNQ3 347 aa13.67□□□□□ -0.22
TNFRSF11A-206ENST00000617039 CADM3Q8N126 398 aa13.67□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ZNF717Q9BY31 904 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FAIMQ9NVQ4 179 aa13.67□□□□□ -0.22
TNFRSF11A-206ENST00000617039 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ABCA4P78363 2273 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FAM221BA6H8Z2 402 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 SAGE2PA6NJ88 616 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 SEMA7AO75326 666 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 NDUFB2O95178 105 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 PRPH2P23942 346 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 EIF2DP41214 584 aaKnown RBP13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 MAP3K8P41279 467 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 E2F1Q01094 437 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 MEP1BQ16820 701 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 BCL2L15Q5TBC7 163 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 LRRN1Q6UXK5 716 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 TSEN54Q7Z6J9 526 aaKnown RBP13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 CA13Q8N1Q1 262 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 TOMM5Q8N4H5 51 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 LSM14AQ8ND56 463 aaKnown RBP13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 OPALINQ96PE5 141 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 AICDAQ9GZX7 198 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ESPL1Q14674 2120 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 COL6A3P12111 3177 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ZNHIT1O43257 154 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 LAMTOR5O43504 91 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FABP5Q01469 135 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 SLX4IPQ5VYV7 408 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 VASNQ6EMK4 673 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 TM9SF4Q92544 642 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 DAZLQ92904 295 aaKnown RBP13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 NECAB3Q96P71 396 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 BTBD2Q9BX70 525 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 NPIPA5E9PKD4 350 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 TEX46H3BTG2 121 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FLRT2O43155 660 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 UPK1BO75841 260 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 UBL4AP11441 157 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 RAET1LQ5VY80 246 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FAAP20Q6NZ36 180 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 KIF18BQ86Y91 864 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 SIRT6Q8N6T7 355 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 OR6N1Q8NGY5 312 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ADAMTS18Q8TE60 1221 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 THAP4Q8WY91 577 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 CREB3L1Q96BA8 519 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 G6PC3Q9BUM1 346 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 OR51B6Q9H340 312 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 SEMA6CQ9H3T2 930 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 GAREM1Q9H706 876 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 NPIPA1Q9UND3 350 aa13.66□□□□□ -0.22
TNFRSF11A-206ENST00000617039 H0YC42 278 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 IGHV3-9P01782 118 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 KLK3P07288 261 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 WDR45BQ5MNZ6 344 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 SHDQ96IW2 340 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 GINS4Q9BRT9 223 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 ZNF639Q9UID6 485 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 E9PI62 339 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 C5orf67F2Z3F1 127 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 NID1P14543 1247 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FOLR1P15328 257 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 YPEL5P62699 121 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 FAM53BQ14153 422 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 P2RY14Q15391 338 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 MEIOBQ8N635 442 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 OR8H1Q8NGG4 311 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 TRMT10AQ8TBZ6 339 aaKnown RBP13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 DYNC2LI1Q8TCX1 351 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 SPACA5Q96QH8 159 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 TSPAN10Q9H1Z9 355 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 MED28Q9H204 178 aa13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 EXOSC1Q9Y3B2 195 aaKnown RBP13.65□□□□□ -0.22
TNFRSF11A-206ENST00000617039 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 PCMT1P22061 227 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 EMP2P54851 167 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 ZMYND11Q15326 602 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 HSD17B12Q53GQ0 312 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 SLC25A25Q6KCM7 469 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 MBOAT2Q6ZWT7 520 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 TRMT61AQ96FX7 289 aaKnown RBP13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 OR5B2Q96R09 309 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 LPAR4Q99677 370 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 PRRG4Q9BZD6 226 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 OBP2AQ9NY56 170 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 ADAM29Q9UKF5 820 aa13.65□□□□□ -0.23
TNFRSF11A-206ENST00000617039 THSD7BQ9C0I4 1608 aa13.64□□□□□ -0.23
TNFRSF11A-206ENST00000617039 TRBV11-1A0A0K0K1C0 115 aa13.64□□□□□ -0.23
TNFRSF11A-206ENST00000617039 ADAM8P78325 824 aa13.64□□□□□ -0.23
TNFRSF11A-206ENST00000617039 POU3F1Q03052 451 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF11A-206ENST00000617039 SGCBQ16585 318 aa13.64□□□□□ -0.23
TNFRSF11A-206ENST00000617039 BAK1Q16611 211 aa13.64□□□□□ -0.23
TNFRSF11A-206ENST00000617039 NIPAL1Q6NVV3 410 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms