RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SLC16A1P53985 500 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 SLC35A1P78382 337 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 KCNJ10P78508 379 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 VLDLRP98155 873 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 TGFBR3Q03167 851 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 SMU1Q2TAY7 513 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 ELOA3BQ3SY89 546 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 CYB5R2Q6BCY4 276 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 EMBQ6PCB8 327 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 B3GLCTQ6Y288 498 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 NUDCD3Q8IVD9 361 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 FAM71CQ8NEG0 241 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 ELOA3Q8NG57 546 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 OR8J2Q8NGG1 315 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 DDIT4LQ96D03 193 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 TRAPPC4Q9Y296 219 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 SLC9A8Q9Y2E8 581 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 ALPK2Q86TB3 2170 aa15.68■□□□□ 0.1
SMN2-213ENST00000614240 DNHD1Q96M86 4753 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 A0A096LNT2 108 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 TMED7-TICAM2A0A0A6YYA0 188 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 PRSS51A0A1B0GVH4 220 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 H7C417 338 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 EIF1BO60739 113 aaKnown RBP15.67■□□□□ 0.1
SMN2-213ENST00000614240 GUSBP08236 651 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 ITGA5P08648 1049 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 CSF3P09919 207 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 EFNA4P52798 201 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 FOXG1P55316 489 aaPredicted RBP15.67■□□□□ 0.1
SMN2-213ENST00000614240 KLHL24Q6TFL4 600 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 FRRS1Q6ZNA5 592 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 NANOS1Q8WY41 292 aaKnown RBP15.67■□□□□ 0.1
SMN2-213ENST00000614240 PMM1Q92871 262 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 ZG16BQ96DA0 208 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 ZIM3Q96PE6 472 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 SAP130Q9H0E3 1048 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 SHARPINQ9H0F6 387 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 AKTIPQ9H8T0 292 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 EXOSC3Q9NQT5 275 aaKnown RBP15.67■□□□□ 0.1
SMN2-213ENST00000614240 MARCOQ9UEW3 520 aaPredicted RBP15.67■□□□□ 0.1
SMN2-213ENST00000614240 LGALS13Q9UHV8 139 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 AMDHD2Q9Y303 409 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 TMED7Q9Y3B3 224 aa15.67■□□□□ 0.1
SMN2-213ENST00000614240 CLDN24A6NM45 220 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 USF1P22415 310 aaPredicted RBP15.66■□□□□ 0.1
SMN2-213ENST00000614240 APOBEC3AP31941 199 aaPredicted RBP15.66■□□□□ 0.1
SMN2-213ENST00000614240 POLR2HP52434 150 aaKnown RBP15.66■□□□□ 0.1
SMN2-213ENST00000614240 SAXO2Q658L1 398 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 C17orf78Q8N4C9 275 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 WDR31Q8NA23 367 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 C10orf105Q8TEF2 133 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 CNOT9Q92600 299 aaKnown RBP15.66■□□□□ 0.1
SMN2-213ENST00000614240 SLC35A5Q9BS91 424 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 SLC17A5Q9NRA2 495 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 SLC7A10Q9NS82 523 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 LPAR3Q9UBY5 353 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 DCTN4Q9UJW0 460 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 FLVCR1Q9Y5Y0 555 aa15.66■□□□□ 0.1
SMN2-213ENST00000614240 TMEM72A0PK05 275 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 WDR91A4D1P6 747 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 WNT11O96014 354 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 MYZAPP0CAP1 466 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 UQCRBP14927 111 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 CDH2P19022 906 aaPredicted RBP15.65■□□□□ 0.1
SMN2-213ENST00000614240 TACR3P29371 465 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 PRPS1P60891 318 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 PHC1P78364 1004 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 FUT5Q11128 374 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 CMIPQ8IY22 773 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 C1orf162Q8NEQ5 155 aaPredicted RBP15.65■□□□□ 0.1
SMN2-213ENST00000614240 PROX1Q92786 737 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 NEURL3Q96EH8 262 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 PKNOX2Q96KN3 472 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 AMBRA1Q9C0C7 1298 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 TMEM160Q9NX00 188 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 OSGIN1Q9UJX0 560 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 MXRA5Q9NR99 2828 aa15.65■□□□□ 0.1
SMN2-213ENST00000614240 ATP6V1G2-DDX39BF2Z307 99 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 AP3D1O14617 1153 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 ZNF208O43345 1280 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 ITM2AO43736 263 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 SCN2BO60939 215 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 KRT33AO76009 404 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 SERPINE1P05121 402 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 CREB1P16220 341 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 ZNF16P17020 682 aaPredicted RBP15.64■□□□□ 0.09
SMN2-213ENST00000614240 S100A3P33764 101 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 ANXA11P50995 505 aaKnown RBP15.64■□□□□ 0.09
SMN2-213ENST00000614240 CLNS1AP54105 237 aaKnown RBP15.64■□□□□ 0.09
SMN2-213ENST00000614240 LSM11P83369 360 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMN2-213ENST00000614240 H3F3AP84243 136 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 GNA13Q14344 377 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 TSPO2Q5TGU0 170 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 RNF130Q86XS8 419 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 ZNF781Q8N8C0 355 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 TESCQ96BS2 214 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 FBXO17Q96EF6 278 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 KCNS3Q9BQ31 491 aa15.64■□□□□ 0.09
SMN2-213ENST00000614240 ROPN1BQ9BZX4 212 aaPredicted RBP15.64■□□□□ 0.09
SMN2-213ENST00000614240 ROPN1Q9HAT0 212 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms