RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 OR2M4Q96R27 311 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 RAB11FIP5Q9BXF6 653 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 NARFLQ9H6Q4 476 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 NOX4Q9NPH5 578 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 NANSQ9NR45 359 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 MED17Q9NVC6 651 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF224Q9NZL3 707 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 GTF2A1LQ9UNN4 478 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 TRABD2BA6NFA1 517 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 GDNFP39905 211 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 UBE2MP61081 183 aaKnown RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 DUSP8Q13202 625 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 GPR18Q14330 331 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 EIPR1Q53HC9 387 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 PYHIN1Q6K0P9 492 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 FCRLAQ7L513 359 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 PAQR7Q86WK9 346 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 OR2L13Q8N349 312 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 CCDC3Q9BQI4 270 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 PITHD1Q9GZP4 211 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 PIGUQ9H490 435 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 ZFP64Q9NPA5 681 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 SLCO1C1Q9NYB5 712 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 HCN3Q9P1Z3 774 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF223Q9UK11 482 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 TDRD6O60522 2096 aaKnown RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 LEUTXA8MZ59 168 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 APODP05090 189 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 FBXO45P0C2W1 286 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 UGT2B7P16662 529 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 HK1P19367 917 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 POU6F2P78424 691 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 MAT1AQ00266 395 aaKnown RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 PLAURQ03405 335 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 TOR2AQ5JU69 321 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 HEPHL1Q6MZM0 1159 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 CREB3L2Q70SY1 520 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 OR9A4Q8NGU2 314 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 RERGQ96A58 199 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 OR2A5Q96R48 311 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 LYARQ9NX58 379 aaKnown RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 ING1Q9UK53 422 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-207ENST00000612273 COPS3Q9UNS2 423 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 RTTNQ86VV8 2226 aa12.95□□□□□ -0.34
COL6A1-207ENST00000612273 KHDRBS3O75525 346 aaKnown RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 DBIP07108 87 aaKnown RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 EPXP11678 715 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 RBMS1P29558 406 aaKnown RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 SELENOPP49908 381 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 CLPPQ16740 277 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 TIGD3Q6B0B8 471 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 FTMTQ8N4E7 242 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 BRIX1Q8TDN6 353 aaKnown RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 TIMM29Q9BSF4 260 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 GHITMQ9H3K2 345 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 DTX4Q9Y2E6 619 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 SPEF1Q9Y4P9 236 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 J3QRE1 110 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 PLPP2O43688 288 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 PROS1P07225 676 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 LSSP48449 732 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 STX4Q12846 297 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 ZBTB37Q5TC79 503 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 OR2T4Q8NH00 348 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 SPACA7Q96KW9 195 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 DDOQ99489 341 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF350Q9GZX5 532 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 SRA1Q9HD15 236 aaKnown RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 RPS6KB2Q9UBS0 482 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 TVP23AA6NH52 213 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 RGS11O94810 467 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 C5AR1P21730 350 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 RPS15AP62244 130 aaKnown RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 STPG1Q5TH74 334 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 Q6ZTK2 550 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 OR51Q1Q8NH59 317 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 OR52I2Q8NH67 350 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 FGF14Q92915 247 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 RSPH9Q9H1X1 276 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-207ENST00000612273 ANKRD19PQ9H560 264 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 HRASLS2Q9NWW9 162 aa12.94□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF593O00488 134 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ARPC1BO15143 372 aaKnown RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 DOK2O60496 412 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 SLC22A5O76082 557 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 CFL1P23528 166 aaKnown RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 PER3P56645 1201 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 HSD17B12Q53GQ0 312 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 TEX261Q6UWH6 196 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 PARM1Q6UWI2 310 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 ZNF764Q96H86 408 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 LMF1Q96S06 567 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 CLEC4MQ9H2X3 399 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 TCEAL2Q9H3H9 227 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-207ENST00000612273 SLC17A4Q9Y2C5 497 aa12.93□□□□□ -0.34
COL6A1-207ENST00000612273 U3KQ87 197 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms