RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 MRTO4Q9UKD2 239 aaKnown RBP12.47□□□□□ -0.41
NEK3-205ENST00000610828 MKL2Q9ULH7 1088 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 SIRT4Q9Y6E7 314 aaPredicted RBP12.47□□□□□ -0.41
NEK3-205ENST00000610828 A0A1B0GX78 115 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 ZNF264O43296 627 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 RNF13O43567 381 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 GMFGO60234 142 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 PTTG1O95997 202 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 MT-ND5P03915 603 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 AZGP1P25311 298 aaKnown RBP12.47□□□□□ -0.41
NEK3-205ENST00000610828 ADH7P40394 386 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 DEFA1P59665 94 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 DEFA3P59666 94 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 CDC20Q12834 499 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 DDI2Q5TDH0 399 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 AGAP7PQ5VUJ5 663 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 WDR74Q6RFH5 385 aaPredicted RBP12.47□□□□□ -0.41
NEK3-205ENST00000610828 PRSS42Q7Z5A4 293 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 OR51L1Q8NGJ5 315 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 AP3S1Q92572 193 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 CCDC74AQ96AQ1 378 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 ZNF501Q96CX3 271 aaPredicted RBP12.47□□□□□ -0.41
NEK3-205ENST00000610828 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
NEK3-205ENST00000610828 ENAMQ9NRM1 1142 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 SEMA5BQ9P283 1151 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
NEK3-205ENST00000610828 ZNF337Q9Y3M9 751 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 MUC3AQ02505 3323 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 DMDP11532 3685 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 J3QLW9 94 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 ICOSLGO75144 302 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 ZNF19P17023 458 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 IL12BP29460 328 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 CD97P48960 835 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 DHPSP49366 369 aaPredicted RBP12.46□□□□□ -0.41
NEK3-205ENST00000610828 SHBQ15464 509 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 ZNF79Q15937 498 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 HLA-DQA1Q5Y7H0 255 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 FAM131AQ6UXB0 335 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 C9orf40Q8IXQ3 194 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 C10orf53Q8N6V4 93 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 NLGN4YQ8NFZ3 816 aaPredicted RBP12.46□□□□□ -0.41
NEK3-205ENST00000610828 OR5W2Q8NH69 310 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 DAZLQ92904 295 aaKnown RBP12.46□□□□□ -0.41
NEK3-205ENST00000610828 DIRAS2Q96HU8 199 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 C4orf36Q96KX1 117 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 SLC7A5P2Q9GIP4 190 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 MIXL1Q9H2W2 232 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 MARCH7Q9H992 704 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 KLHL1Q9NR64 748 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 WDR70Q9NW82 654 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 MUTYHQ9UIF7 546 aa12.46□□□□□ -0.41
NEK3-205ENST00000610828 IGKV1D-42A0A075B6H8 117 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 SLC35F4A4IF30 521 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 BLOC1S5-TXNDC5H3BN57 136 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 DVL2O14641 736 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 SERPINI2O75830 405 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 NCR1O76036 304 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 OR7A10O76100 309 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 PNMTP11086 282 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 NR0B1P51843 470 aaKnown RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 POU4F2Q12837 409 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 EBPQ15125 230 aaKnown RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 FAAH2Q6GMR7 532 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 DPY19L2P2Q6ZN68 376 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 TMEM91Q6ZNR0 172 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 SHISA6Q6ZSJ9 500 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 ZNF563Q8TA94 476 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 TTTY10Q9BZA0 68 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 SLC19A3Q9BZV2 496 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 VN1R1Q9GZP7 353 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 HAO2Q9NYQ3 351 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 COMMD3Q9UBI1 195 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 COPS7AQ9UBW8 275 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 KLHL21Q9UJP4 597 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 ATXN7L1Q9ULK2 861 aaPredicted RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 POLHQ9Y253 713 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 TRAPPC4Q9Y296 219 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 MPDZO75970 2070 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 SHISA3A0PJX4 238 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 E9PI62 339 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 RGS9O75916 674 aaPredicted RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 GRK6P43250 576 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 HCCSP53701 268 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 OR12D2P58182 307 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 ZNF85Q03923 595 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 GPR50Q13585 617 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 KRR1Q13601 381 aaKnown RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 ARL9Q6T311 187 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 ATG4DQ86TL0 474 aaPredicted RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 GPALPP1Q8IXQ4 340 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 OR14A16Q8NHC5 309 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 KCNN2Q9H2S1 579 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 ZNF768Q9H5H4 540 aaKnown RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 EXOSC3Q9NQT5 275 aaKnown RBP12.45□□□□□ -0.42
NEK3-205ENST00000610828 CTSFQ9UBX1 484 aa12.45□□□□□ -0.42
NEK3-205ENST00000610828 ZMIZ1Q9ULJ6 1067 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms