RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 DUSP3P51452 185 aaPredicted RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 PRRX1P54821 245 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 CARD18P57730 90 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 POLR2GP62487 172 aaKnown RBP eCLIP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 UBE2IP63279 158 aaKnown RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 TPM4P67936 248 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 KLRB1Q12918 225 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 SRSF5Q13243 272 aaKnown RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 DYNC1I2Q13409 638 aaKnown RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 CRMP1Q14194 572 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 KCNJ11Q14654 390 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 CASP8Q14790 479 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 SLC15A2Q16348 729 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 PPP1R3AQ16821 1122 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 NHLRC3Q5JS37 347 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 ANXA8L1Q5VT79 327 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 PRAMEF20Q5VT98 475 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 ERICH5Q6P6B1 374 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 CCDC121Q6ZUS5 278 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 SERINC5Q86VE9 423 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 ECHDC2Q86YB7 292 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 SLC22A18ASQ8N1D0 253 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 FAM83FQ8NEG4 500 aaPredicted RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 OR4D9Q8NGE8 314 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 ENKURQ8TC29 256 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 C18orf12Q96KH6 178 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 SLC35A5Q9BS91 424 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 CENPHQ9H3R5 247 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 LRRC19Q9H756 370 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 PANK3Q9H999 370 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 C12orf10Q9HB07 376 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 LY9Q9HBG7 655 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 C8orf4Q9NR00 106 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 PNO1Q9NRX1 252 aaKnown RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 HMGXB4Q9UGU5 601 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 ANGPTL2Q9UKU9 493 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 SAMD4AQ9UPU9 718 aaKnown RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 STK38LQ9Y2H1 464 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 L3MBTL1Q9Y468 752 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 BZW2Q9Y6E2 419 aaKnown RBP4.05□□□□□ -1.76
LINC00397-202ENST00000606785 NOTCH4Q99466 2003 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 GON4LQ3T8J9 2241 aa4.05□□□□□ -1.76
LINC00397-202ENST00000606785 EEA1Q15075 1411 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 HEATR9A2RTY3 570 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 NCF1BA6NI72 391 aaPredicted RBP4.04□□□□□ -1.76
LINC00397-202ENST00000606785 NCF1CA8MVU1 366 aaPredicted RBP4.04□□□□□ -1.76
LINC00397-202ENST00000606785 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 H3BQV1 296 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 H7C423 109 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 SLC17A2O00624 439 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 RAMP3O60896 148 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 DIRAS1O95057 198 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 CLDN9O95484 217 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 RENP00797 406 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 AGTP01019 485 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 CCDC166P0CW27 439 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 CCDC130P13994 396 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 IDSP22304 550 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 GALP22466 123 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 GCAP28676 217 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 OR1G1P47890 313 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 HSPA13P48723 471 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 LIM2P55344 173 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 PAX8Q06710 450 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 SLC10A1Q14973 349 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 C1orf220Q5T0J3 134 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 ZC2HC1BQ5TFG8 222 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 LEMD1Q68G75 181 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 FAAP20Q6NZ36 180 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 FAM199XQ6PEV8 388 aaPredicted RBP4.04□□□□□ -1.76
LINC00397-202ENST00000606785 PAQR6Q6TCH4 344 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 LRRC31Q6UY01 552 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 KDM7AQ6ZMT4 941 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 H2BFWTQ7Z2G1 175 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 PAQR7Q86WK9 346 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 STX12Q86Y82 276 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 ALLCQ8N6M5 410 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 CSNK1A1LQ8N752 337 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 WDSUB1Q8N9V3 476 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 OR8K1Q8NGG5 319 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 TFB1MQ8WVM0 346 aaKnown RBP4.04□□□□□ -1.76
LINC00397-202ENST00000606785 CEP19Q96LK0 163 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 C9orf16Q9BUW7 83 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 TRIM62Q9BVG3 475 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 NUP58Q9BVL2 599 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 FAM192AQ9GZU8 254 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 DRC3Q9H069 523 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 TXLNGQ9NUQ3 528 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 CD300AQ9UGN4 299 aa4.04□□□□□ -1.76
LINC00397-202ENST00000606785 SH3TC1Q8TE82 1336 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 C1orf232A0A0U1RR37 186 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 LOC105371267A0A1B0GV96 52 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 GOLGA8IPA6NC78 632 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 ZNF840PA6NDX5 716 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 GOLGA8JA6NMD2 632 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 GOLGA8TH3BQL2 631 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 BIRC5O15392 142 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 LINC01565O15544 149 aa4.03□□□□□ -1.76
LINC00397-202ENST00000606785 UPK3AO75631 287 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms