RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RAD51DO75771 328 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 IGHV4-39P01824 125 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 GSNP06396 782 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 NR2F1P10589 423 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 RPS4Y1P22090 263 aaKnown RBP6.71□□□□□ -1.34
CUX1-219ENST00000606749 TACR3P29371 465 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 ACVR1BP36896 505 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 SLC1A3P43003 542 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 MAGEA8P43361 318 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 ANXA11P50995 505 aaKnown RBP6.71□□□□□ -1.34
CUX1-219ENST00000606749 POLR2HP52434 150 aaKnown RBP6.71□□□□□ -1.34
CUX1-219ENST00000606749 MAP2K6P52564 334 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 FOXG1P55316 489 aaPredicted RBP6.71□□□□□ -1.34
CUX1-219ENST00000606749 WDR4P57081 412 aaKnown RBP6.71□□□□□ -1.34
CUX1-219ENST00000606749 SLC35A1P78382 337 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 HPCAP84074 193 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 PPP2R2BQ00005 443 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 LRRC74AQ0VAA2 488 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 VEZF1Q14119 521 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 MAPK11Q15759 364 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 COX20Q5RI15 118 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 HHATQ5VTY9 493 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 LRRC74BQ6ZQY2 392 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 DNM1P46Q6ZS02 220 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 DTX2Q86UW9 622 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 TRIML2Q8N7C3 387 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 MAPK1IP1LQ8NDC0 245 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 OR52N5Q8NH56 324 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 PIGXQ8TBF5 258 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 DDIT4LQ96D03 193 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 RADILQ96JH8 1075 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 TRAF4Q9BUZ4 470 aaPredicted RBP6.71□□□□□ -1.34
CUX1-219ENST00000606749 ADAM19Q9H013 955 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 SLCO5A1Q9H2Y9 848 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 WDR55Q9H6Y2 383 aaPredicted RBP6.71□□□□□ -1.34
CUX1-219ENST00000606749 THAP1Q9NVV9 213 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 ASB6Q9NWX5 421 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 B3GALT5Q9Y2C3 310 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 TMED7Q9Y3B3 224 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 SLC25A15Q9Y619 301 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 ZANQ9Y493 2812 aa6.71□□□□□ -1.34
CUX1-219ENST00000606749 CADP27708 2225 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 CSPG4Q6UVK1 2322 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 A0A1W2PR80 420 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 ZC3H12DA2A288 527 aaKnown RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 CFAP73A6NFT4 308 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 TRPC5OSA6NMA1 111 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 E7EQL1 145 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 PDLIM1O00151 329 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 FAAHO00519 579 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 RFXANKO14593 260 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 HDAC3O15379 428 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 SNNO75324 88 aaPredicted RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 KRT75O95678 551 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 IL6P05231 212 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 DBIP07108 87 aaKnown RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 ITGA5P08648 1049 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 KITP10721 976 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 IMPDH2P12268 514 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 IL7RP16871 459 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 PTNP21246 168 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 PTAFRP25105 342 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 CD40P25942 277 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 EPHA3P29320 983 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 ACAA2P42765 397 aaKnown RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 MVDP53602 400 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 CDH11P55287 796 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 EPS8Q12929 822 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 GNA13Q14344 377 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 SLC17A1Q14916 467 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 GABRA6Q16445 453 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 GSTA3Q16772 222 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 MRPL2Q5T653 305 aaKnown RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 AGAP6Q5VW22 663 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 OR7E24Q6IFN5 339 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 KLHL17Q6TDP4 642 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 TMEM108Q6UXF1 575 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 CROCCP2Q86T23 111 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 LSRQ86X29 649 aaPredicted RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 PEX5LQ8IYB4 626 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 ANKRD42Q8N9B4 389 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 ZIC4Q8N9L1 334 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 WDR31Q8NA23 367 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 GLB1L3Q8NCI6 653 aaPredicted RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 OR52E4Q8NGH9 312 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 PNPT1Q8TCS8 783 aaKnown RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 WDR60Q8WVS4 1066 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 ZBTB18Q99592 522 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 MDFIQ99750 246 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 NAA11Q9BSU3 229 aaPredicted RBP6.7□□□□□ -1.34
CUX1-219ENST00000606749 C1QTNF6Q9BXI9 259 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 ALG2Q9H553 416 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 SLC7A10Q9NS82 523 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 SLC6A13Q9NSD5 602 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 FAIMQ9NVQ4 179 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 RLIMQ9NVW2 624 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 PARPBPQ9NWS1 579 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 TAS2R16Q9NYV7 291 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 MALT1Q9UDY8 824 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 GDF2Q9UK05 429 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms