RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 NCK1P16333 377 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
RNF40-212ENST00000602784 RASSF2P50749 326 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 CSNK2A1P68400 391 aaPredicted RBP12.44□□□□□ -0.42
RNF40-212ENST00000602784 MYBPHQ13203 477 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 PON3Q15166 354 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 DNAL1Q4LDG9 190 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 ALG10BQ5I7T1 473 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 C5orf46Q6UWT4 87 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 NCCRP1Q6ZVX7 275 aaPredicted RBP12.44□□□□□ -0.42
RNF40-212ENST00000602784 CARM1Q86X55 608 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 C9orf106Q8NAJ2 232 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 LILRB4Q8NHJ6 448 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 FNDC9Q8TBE3 224 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 STK35Q8TDR2 534 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 SLC7A6OSQ96CW6 309 aaPredicted RBP12.44□□□□□ -0.42
RNF40-212ENST00000602784 TPD52L3Q96J77 140 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 PRR14Q9BWN1 585 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 MUC13Q9H3R2 512 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 RNF122Q9H9V4 155 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
RNF40-212ENST00000602784 PACSIN3Q9UKS6 424 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 SAMD4AQ9UPU9 718 aaKnown RBP12.44□□□□□ -0.42
RNF40-212ENST00000602784 RNF6Q9Y252 685 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 SPTAN1Q13813 2472 aaKnown RBP12.44□□□□□ -0.42
RNF40-212ENST00000602784 DOCK7Q96N67 2140 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 A0A087WUJ7 227 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 A0A1W2PNR3 127 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 TRAPPC13A5PLN9 417 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 ELOA3DA6NLF2 546 aaPredicted RBP12.43□□□□□ -0.42
RNF40-212ENST00000602784 SULT2B1O00204 365 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 GYG2O15488 501 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 ZNF682O95780 498 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 CCNA2P20248 432 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 CTSSP25774 331 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 DIO1P49895 249 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 AGFG1P52594 562 aaKnown RBP12.43□□□□□ -0.42
RNF40-212ENST00000602784 TRIM25Q14258 630 aaKnown RBP12.43□□□□□ -0.42
RNF40-212ENST00000602784 ZNF239Q16600 458 aaKnown RBP12.43□□□□□ -0.42
RNF40-212ENST00000602784 ELOA3BQ3SY89 546 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 ENTPD8Q5MY95 495 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 GTF2IRD2BQ6EKJ0 949 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 LINC00114Q6XXX2 140 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 P4HA3Q7Z4N8 544 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 GTF2IRD2Q86UP8 949 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 RBM45Q8IUH3 476 aaKnown RBP12.43□□□□□ -0.42
RNF40-212ENST00000602784 SLC43A2Q8N370 569 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 ELOA3Q8NG57 546 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 VANGL1Q8TAA9 524 aaPredicted RBP12.43□□□□□ -0.42
RNF40-212ENST00000602784 ADAMTS16Q8TE57 1224 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 GEMIN6Q8WXD5 167 aaKnown RBP12.43□□□□□ -0.42
RNF40-212ENST00000602784 SDCCAG3Q96C92 435 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 ARL5BQ96KC2 179 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 BTBD10Q9BSF8 475 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 SRXN1Q9BYN0 137 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 OR11A1Q9GZK7 315 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 GP6Q9HCN6 339 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 GLRX2Q9NS18 164 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 ACTR3BQ9P1U1 418 aa12.43□□□□□ -0.42
RNF40-212ENST00000602784 ZC3H12DA2A288 527 aaKnown RBP12.42□□□□□ -0.42
RNF40-212ENST00000602784 ARPC2O15144 300 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 CHP2O43745 196 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 EIF1BO60739 113 aaKnown RBP12.42□□□□□ -0.42
RNF40-212ENST00000602784 AQP8O94778 261 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 RNF224P0DH78 156 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 TMIGD3P0DMS9 266 aaPredicted RBP12.42□□□□□ -0.42
RNF40-212ENST00000602784 THRBP10828 461 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 OPRM1P35372 400 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 MSX2P35548 267 aaPredicted RBP12.42□□□□□ -0.42
RNF40-212ENST00000602784 OR1E2P47887 323 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 CDH12P55289 794 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 SLC35A1P78382 337 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 H3F3AP84243 136 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 RNPS1Q15287 305 aaKnown RBP12.42□□□□□ -0.42
RNF40-212ENST00000602784 IFI44LQ53G44 452 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 FKBP9P1Q75LS8 142 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 VTCN1Q7Z7D3 282 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 CCDC71Q8IV32 467 aaPredicted RBP12.42□□□□□ -0.42
RNF40-212ENST00000602784 NAXEQ8NCW5 288 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 POP5Q969H6 163 aaKnown RBP12.42□□□□□ -0.42
RNF40-212ENST00000602784 ZHX1-C8orf76Q96EF9 292 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 MPP4Q96JB8 637 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 HSH2DQ96JZ2 352 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 NSMCE2Q96MF7 247 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 TMEM43Q9BTV4 400 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 SFXN3Q9BWM7 321 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 PRRG4Q9BZD6 226 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 BAHCC1Q9P281 2608 aa12.42□□□□□ -0.42
RNF40-212ENST00000602784 KIAA1549Q9HCM3 1950 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 MED12LQ86YW9 2145 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 LIPT2A6NK58 231 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 CPSF4LA6NMK7 179 aaKnown RBP12.41□□□□□ -0.42
RNF40-212ENST00000602784 DVL2O14641 736 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 OR5F1O95221 314 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 LYPD3O95274 346 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 CLDN14O95500 239 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 IFNW1P05000 195 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 GPIP06744 558 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 TNFRSF1BP20333 461 aa12.41□□□□□ -0.42
RNF40-212ENST00000602784 ENPP1P22413 925 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms