RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 NPIPB7O75200 414 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 THBDP07204 575 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 VIMP08670 466 aaKnown RBP15.54■□□□□ 0.08
IRF3-230ENST00000601809 NTF4P34130 210 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 MTPNP58546 118 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 CSNK2A1P68400 391 aaPredicted RBP15.54■□□□□ 0.08
IRF3-230ENST00000601809 SCARB2Q14108 478 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 GLIPR1L2Q4G1C9 344 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 WBP2NLQ6ICG8 309 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 ATG4DQ86TL0 474 aaPredicted RBP15.54■□□□□ 0.08
IRF3-230ENST00000601809 CDC20BQ86Y33 519 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 REXO5Q96IC2 774 aaKnown RBP15.54■□□□□ 0.08
IRF3-230ENST00000601809 WFDC6Q9BQY6 131 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 SLC39A3Q9BRY0 314 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 CLEC4MQ9H2X3 399 aaPredicted RBP15.54■□□□□ 0.08
IRF3-230ENST00000601809 LIME1Q9H400 295 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 KLHL9Q9P2J3 617 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 ZNF232Q9UNY5 417 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 VPS13CQ709C8 3753 aa15.54■□□□□ 0.08
IRF3-230ENST00000601809 PRR14LQ5THK1 2151 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 ZNF469Q96JG9 3925 aaPredicted RBP15.53■□□□□ 0.08
IRF3-230ENST00000601809 EVPLLA8MZ36 301 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 PSMB1P20618 241 aaKnown RBP15.53■□□□□ 0.08
IRF3-230ENST00000601809 CRYGSP22914 178 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 SLC16A1P53985 500 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 RBBP4Q09028 425 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 RASGEF1BQ0VAM2 473 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 SF3A3Q12874 501 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■■■□□ 16.7
IRF3-230ENST00000601809 TRMT5Q32P41 509 aaKnown RBP15.53■□□□□ 0.08
IRF3-230ENST00000601809 COQ5Q5HYK3 327 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 TMEM201Q5SNT2 666 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 BEND4Q6ZU67 534 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 HIPK4Q8NE63 616 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 DNAJA3Q96EY1 480 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 TACO1Q9BSH4 297 aaKnown RBP15.53■□□□□ 0.08
IRF3-230ENST00000601809 POLDIP3Q9BY77 421 aaKnown RBP15.53■□□□□ 0.08
IRF3-230ENST00000601809 POTEKPQ9BYX7 375 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 C12orf49Q9H741 205 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 PLEKHF2Q9H8W4 249 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 KLHL28Q9NXS3 571 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 TMEM181Q9P2C4 612 aa15.53■□□□□ 0.08
IRF3-230ENST00000601809 RAI1Q7Z5J4 1906 aaPredicted RBP15.53■□□□□ 0.08
IRF3-230ENST00000601809 C5orf58C9J3I9 102 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 TPST2O60704 377 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 MFN2O95140 757 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 TFPIP10646 304 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 UQCRBP14927 111 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 CCNA2P20248 432 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 HTR2AP28223 471 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 ADSLP30566 484 aaPredicted RBP15.52■□□□□ 0.08
IRF3-230ENST00000601809 DNAJA1P31689 397 aaKnown RBP15.52■□□□□ 0.08
IRF3-230ENST00000601809 OR3A2P47893 321 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 CRYBA2P53672 197 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 HOXC5Q00444 222 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 DMTNQ08495 405 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 NFYCQ13952 458 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 CAPRIN1Q14444 709 aaKnown RBP15.52■□□□□ 0.08
IRF3-230ENST00000601809 NANOGP8Q6NSW7 305 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 C6orf89Q6UWU4 347 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 CALHM3Q86XJ0 350 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 LSMEM1Q8N8F7 131 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 DDIT4LQ96D03 193 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 OR10A4Q9H209 315 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 NANOGQ9H9S0 305 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 MRGBPQ9NV56 204 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 NDRG3Q9UGV2 375 aa15.52■□□□□ 0.08
IRF3-230ENST00000601809 LIPT2A6NK58 231 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 SLC6A2P23975 617 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 P2RY4P51582 365 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 EGR4Q05215 589 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 BNIP2Q12982 314 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 EXOC3L2Q2M3D2 409 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 REP15Q6BDI9 236 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 CCDC103Q8IW40 242 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 GPR32P1Q8NGA4 272 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 ARMC7Q9H6L4 198 aa15.51■□□□□ 0.07
IRF3-230ENST00000601809 KCNJ5P48544 419 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 RABL3Q5HYI8 236 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 ANKRD34AQ69YU3 496 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 SEZ6L2Q6UXD5 910 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 CADM2Q8N3J6 435 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 C11orf65Q8NCR3 313 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 ZNF775Q96BV0 537 aaPredicted RBP15.5■□□□□ 0.07
IRF3-230ENST00000601809 LRRC58Q96CX6 371 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 PTDSS2Q9BVG9 487 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 SPATA5L1Q9BVQ7 753 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 KLHL4Q9C0H6 718 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 C12orf10Q9HB07 376 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 PRSS50Q9UI38 385 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 GPR52Q9Y2T5 361 aa15.5■□□□□ 0.07
IRF3-230ENST00000601809 HIVEP1P15822 2718 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 BBIP1A8MTZ0 92 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 A8MVM7 634 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 FTCDNL1E5RQL4 147 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 SLC22A2O15244 555 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 KLF4O43474 513 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 NPPAP01160 153 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 PPP3CBP16298 524 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 COX5AP20674 150 aa15.49■□□□□ 0.07
IRF3-230ENST00000601809 FPR1P21462 350 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms