RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 TP53INP1Q96A56 240 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 SLC25A46Q96AG3 418 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 CLEC2DQ9UHP7 191 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 TRBV11-1A0A0K0K1C0 115 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 A0A1W2PQ72 361 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 CDRT15L2A8MXV6 281 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 AP3D1O14617 1153 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 KLF4O43474 513 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 IGKV1D-16P01601 117 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 HMGN1P05114 100 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 COX6A1P12074 109 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 RPS4Y1P22090 263 aaKnown RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 TNFSF8P32971 234 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 DLSTP36957 453 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 RPS19P39019 145 aaKnown RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 MTNR1AP48039 350 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 EIF2B2P49770 351 aaKnown RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 NR0B1P51843 470 aaKnown RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 RPS18P62269 152 aaKnown RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 SOWAHCQ53LP3 525 aaPredicted RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 ZNF730Q6ZMV8 503 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 NDUFAF7Q7L592 441 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 RNF113BQ8IZP6 322 aaKnown RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 ZNF441Q8N8Z8 693 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 OR11G2Q8NGC1 345 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 AP3S1Q92572 193 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 RNF167Q9H6Y7 350 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 QPCTLQ9NXS2 382 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 ZNF223Q9UK11 482 aaPredicted RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 ZNF443Q9Y2A4 671 aaPredicted RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 GRIP1Q9Y3R0 1128 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 SEC14L5O43304 696 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 PRKNO60260 465 aaPredicted RBP10.71□□□□□ -0.69
VRK3-223ENST00000601341 FMO6PO60774 539 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 ZFAND5O76080 213 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 IL33O95760 270 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 IGFBP1P08833 259 aaPredicted RBP10.71□□□□□ -0.69
VRK3-223ENST00000601341 CFL1P23528 166 aaKnown RBP10.71□□□□□ -0.69
VRK3-223ENST00000601341 LCN1P31025 176 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 GABRA5P31644 462 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 SOX3P41225 446 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 SLC9A3P48764 834 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 TMED10P49755 219 aaKnown RBP10.71□□□□□ -0.69
VRK3-223ENST00000601341 NRG3P56975 720 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 RSPO4Q2I0M5 234 aaPredicted RBP10.71□□□□□ -0.69
VRK3-223ENST00000601341 BTBD16Q32M84 506 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 ARMC4Q5T2S8 1044 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 TMPRSS11AQ6ZMR5 421 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 MBOAT2Q6ZWT7 520 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 ZAR1Q86SH2 424 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 KIF18BQ86Y91 864 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 ANKK1Q8NFD2 765 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 OIT3Q8WWZ8 545 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 NKD1Q969G9 470 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 IMMP1LQ96LU5 166 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 GPA33Q99795 319 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 NRSN2Q9GZP1 204 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 HOXD1Q9GZZ0 328 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 KCNE5Q9UJ90 142 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 GSTK1Q9Y2Q3 226 aa10.71□□□□□ -0.69
VRK3-223ENST00000601341 AHCTF1Q8WYP5 2266 aa10.71□□□□□ -0.7
VRK3-223ENST00000601341 NSG1A0A0A6YYJ2 146 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 CDC14CA4D256 554 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 PEX12O00623 359 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 SOCS6O14544 535 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 TERTO14746 1132 aaKnown RBP10.7□□□□□ -0.7
VRK3-223ENST00000601341 SNPHO15079 494 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 DXOO77932 396 aaKnown RBP10.7□□□□□ -0.7
VRK3-223ENST00000601341 ICAM2P13598 275 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 NID1P14543 1247 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 PTBP1P26599 531 aaKnown RBP eCLIP10.7□□□□□ -0.7
VRK3-223ENST00000601341 OTX2P32243 289 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 ATP12AP54707 1039 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 RGS8P57771 180 aaPredicted RBP10.7□□□□□ -0.7
VRK3-223ENST00000601341 EEF1A1P68104 462 aaKnown RBP10.7□□□□□ -0.7
VRK3-223ENST00000601341 BDH1Q02338 343 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 PLCXD2Q0VAA5 305 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 GPR50Q13585 617 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 ZNF141Q15928 474 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 MAPK14Q16539 360 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 ZSWIM7Q19AV6 140 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 RPL13AP3Q6NVV1 102 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 PPP1R32Q7Z5V6 425 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 DTX1Q86Y01 620 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 SLC43A2Q8N370 569 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 IQCF1Q8N6M8 205 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 IL22RA1Q8N6P7 574 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 ZNF485Q8NCK3 441 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 OR52N1Q8NH53 320 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 M1APQ8TC57 530 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 ELP5Q8TE02 316 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 UFD1Q92890 307 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 KCTD7Q96MP8 289 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 LMF1Q96S06 567 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 SDHCQ99643 169 aaPredicted RBP10.7□□□□□ -0.7
VRK3-223ENST00000601341 ARHGAP9Q9BRR9 750 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 DEFB126Q9BYW3 111 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 BARHL1Q9BZE3 327 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 FN3KQ9H479 309 aa10.7□□□□□ -0.7
VRK3-223ENST00000601341 EXOSC4Q9NPD3 245 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms