RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ZNF620Q6ZNG0 422 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 SULF2Q8IWU5 870 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 TMEM178AQ8NBL3 297 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 POC1BQ8TC44 478 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 FANK1Q8TC84 345 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 TM9SF4Q92544 642 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 OSTF1Q92882 214 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 DDIT4LQ96D03 193 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 HES7Q9BYE0 225 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 EGLN3Q9H6Z9 239 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 HCN1O60741 890 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 OR7A10O76100 309 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 RCBTB2O95199 551 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 WISP1O95388 367 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 TCEA1P23193 301 aaKnown RBP20.43■□□□□ 0.86
IRF3-228ENST00000601291 UCNP55089 124 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 TOMM20Q15388 145 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 ZNF766Q5HY98 468 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 C3orf33Q6P1S2 294 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 OAFQ86UD1 273 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 LSRQ86X29 649 aaPredicted RBP20.43■□□□□ 0.86
IRF3-228ENST00000601291 KIF18BQ86Y91 864 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 GTPBP8Q8N3Z3 284 aaPredicted RBP20.43■□□□□ 0.86
IRF3-228ENST00000601291 OR13C2Q8NGS9 318 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 SMAD5Q99717 465 aaKnown RBP20.43■□□□□ 0.86
IRF3-228ENST00000601291 NPAS1Q99742 590 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 TBC1D23Q9NUY8 699 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 ZNF337Q9Y3M9 751 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 PIEZO1Q92508 2521 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 FREM2Q5SZK8 3169 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 AKAP13Q12802 2813 aa20.43■□□□□ 0.86
IRF3-228ENST00000601291 ZAR1LA6NP61 321 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 SHISA8B8ZZ34 492 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 E9PQ18 207 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 AHSA1O95433 338 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 ZNF17P17021 662 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 FKBP2P26885 142 aaKnown RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 ELK4P28324 431 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 GGT2P36268 569 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 TNFSF10P50591 281 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 NUP107P57740 925 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 FOXO1Q12778 655 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 SELENBP1Q13228 472 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 ZNF74Q16587 644 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 GLYR1Q49A26 553 aaPredicted RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 C1orf140Q5VVS0 124 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 RAET1LQ5VY80 246 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 Q6ZPB1 254 aaPredicted RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 GALNTL5Q7Z4T8 443 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 OR52L1Q8NGH7 329 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 KTI12Q96EK9 354 aaPredicted RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 SCMH1Q96GD3 660 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 IL20Q9NYY1 176 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 HSPE1-MOB4S4R3N1 261 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 MED13Q9UHV7 2174 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 PINLYPA6NC86 204 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 K7ENP7 123 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 NPIPB7O75200 414 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 IGFBP1P08833 259 aaPredicted RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 BMP7P18075 431 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 FUT1P19526 365 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 GDF1P27539 372 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 RPS5P46782 204 aaKnown RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 TMPRSS3P57727 454 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 CDC42P60953 191 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 ZBED5Q49AG3 693 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 FAM69AQ5T7M9 428 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 INO80CQ6PI98 192 aaPredicted RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 SLC46A3Q7Z3Q1 461 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 THAP5Q7Z6K1 395 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 DEPDC4Q8N2C3 294 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 SLC25A43Q8WUT9 341 aaPredicted RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 LIPHQ8WWY8 451 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 PIGQQ9BRB3 760 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 TEX12Q9BXU0 123 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 OR52D1Q9H346 318 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 NANSQ9NR45 359 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 SIGLEC7Q9Y286 467 aa20.42■□□□□ 0.86
IRF3-228ENST00000601291 RPH3AQ9Y2J0 694 aaPredicted RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 MRPS18CQ9Y3D5 142 aaKnown RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 PCDHGA9Q9Y5G4 932 aaKnown RBP20.42■□□□□ 0.86
IRF3-228ENST00000601291 SPTBN2O15020 2390 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 ZC3H12DA2A288 527 aaKnown RBP20.41■□□□□ 0.86
IRF3-228ENST00000601291 OR2T1O43869 369 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 MT-ATP6P00846 226 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 SMSP52788 366 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 IL5RAQ01344 420 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 SLX4IPQ5VYV7 408 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 SMARCD3Q6STE5 483 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 OR14L1PQ8NHC6 308 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 FAM81AQ8TBF8 368 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 TAAR8Q969N4 342 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 NR1H4Q96RI1 486 aaPredicted RBP20.41■□□□□ 0.86
IRF3-228ENST00000601291 PLA2G12AQ9BZM1 189 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 UBQLN3Q9H347 655 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 FKRPQ9H9S5 495 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 PNPLA3Q9NST1 481 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 UBAP1Q9NZ09 502 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 ZNF229Q9UJW7 825 aa20.41■□□□□ 0.86
IRF3-228ENST00000601291 RAXQ9Y2V3 346 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms