RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ANKFN1Q8N957 763 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 OR52E4Q8NGH9 312 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 CCDC115Q96NT0 180 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC35A5Q9BS91 424 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC38A1Q9H2H9 487 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 TMEM181Q9P2C4 612 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 OSGIN1Q9UJX0 560 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 CHD3Q12873 2000 aaKnown RBP15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 MXRA5Q9NR99 2828 aa15.8■□□□□ 0.12
CHMP2A-208ENST00000601220 CIB4A0PJX0 185 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 TMEM72A0PK05 275 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 AGAP5A6NIR3 686 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 CCT8L1PA6NM43 557 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 MRPL33O75394 65 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 CCNA2P20248 432 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 KHKP50053 298 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 RPL14P50914 215 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 OR2B6P58173 313 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC25A3Q00325 362 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 MPP2Q14168 576 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 SYPL1Q16563 259 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 HMBOX1Q6NT76 420 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC22A25Q6T423 547 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 RNF130Q86XS8 419 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 VPS37AQ8NEZ2 397 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 ZHX1-C8orf76Q96EF9 292 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 TRNT1Q96Q11 434 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 RHNO1Q9BSD3 238 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 MARCOQ9UEW3 520 aaPredicted RBP15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 BTNL2Q9UIR0 455 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 FLVCR1Q9Y5Y0 555 aa15.79■□□□□ 0.12
CHMP2A-208ENST00000601220 SVEP1Q4LDE5 3571 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 TMED7-TICAM2A0A0A6YYA0 188 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ELOA3DA6NLF2 546 aaPredicted RBP15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 FAAHO00519 579 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ZNF208O43345 1280 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 CHRM4P08173 479 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 RPS4Y1P22090 263 aaKnown RBP15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 IL12AP29459 219 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 MAGEA8P43361 318 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 HTR3AP46098 478 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC1A6P48664 564 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC17A1Q14916 467 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 MAPK11Q15759 364 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ELOA3BQ3SY89 546 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 FAM174BQ3ZCQ3 159 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 GPAT3Q53EU6 434 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 OR7E24Q6IFN5 339 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 KLHL17Q6TDP4 642 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 CMIPQ8IY22 773 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 MUC15Q8N387 334 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ZIC4Q8N9L1 334 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ELOA3Q8NG57 546 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ADAD1Q96M93 576 aaKnown RBP15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 C1QTNF6Q9BXI9 259 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 NUF2Q9BZD4 464 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ADAM19Q9H013 955 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 MEAF6Q9HAF1 191 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 SSU72Q9NP77 194 aaKnown RBP15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC7A10Q9NS82 523 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 DCTN4Q9UJW0 460 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 TMED7Q9Y3B3 224 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 RTTNQ86VV8 2226 aa15.78■□□□□ 0.12
CHMP2A-208ENST00000601220 ZC3H12DA2A288 527 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 FAM234BA2RU67 622 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 A8MV72 311 aaPredicted RBP15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 E9PBE3 544 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 ALDOCP09972 364 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 LBPP18428 481 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 TACR3P29371 465 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 CHI3L1P36222 383 aaPredicted RBP15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC1A3P43003 542 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 POLR2HP52434 150 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 CLNS1AP54105 237 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 UFM1P61960 85 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC35A1P78382 337 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 LOXL1Q08397 574 aaPredicted RBP15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 DPY19L1Q2PZI1 675 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 TSPO2Q5TGU0 170 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 OGFOD2Q6N063 350 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 ZNF544Q6NX49 715 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 LRRC74BQ6ZQY2 392 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 HTRA1Q92743 480 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 TNFRSF13CQ96RJ3 184 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 INPP5KQ9BT40 448 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 SLC17A5Q9NRA2 495 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 PNPOQ9NVS9 261 aa15.77■□□□□ 0.12
CHMP2A-208ENST00000601220 ALPK2Q86TB3 2170 aa15.77■□□□□ 0.11
CHMP2A-208ENST00000601220 PLCE1Q9P212 2302 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 CCDC154A6NI56 674 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 H7C417 338 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 M0R1B8 84 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 EIF1BO60739 113 aaKnown RBP15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 SNUPNO95149 360 aaKnown RBP15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 S100A3P33764 101 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 CDKN2CP42773 168 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 FABP6P51161 128 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 NUDT6P53370 316 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 DSCR9P59020 149 aa15.76■□□□□ 0.11
CHMP2A-208ENST00000601220 EPS8Q12929 822 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms